Antibiotic tolerance is associated with a broad and complex transcriptional response in E. coli.

作者: Nicholas C Butzin , Heather S Deter , Tahmina Hossain

DOI: 10.1038/S41598-021-85509-7

关键词:

摘要: Antibiotic treatment kills a large portion of population, while small, tolerant subpopulation survives. Tolerant bacteria disrupt antibiotic efficacy and increase the likelihood that population gains resistance, growing health concern. We examined how E. coli transcriptional networks changed in response to lethal ampicillin concentrations. are first apply regulatory network (TRN) analysis tolerance by leveraging existing knowledge our data. TRN shows gene expression changes specific likely caused sigma transcription factors typically regulated proteolysis. These results demonstrate survive concentration proteins change activity cause coordinated leverages multiple systems.

参考文章(106)
P.E. Rouvière, A. De Las Peñas, J. Mecsas, C.Z. Lu, K.E. Rudd, C.A. Gross, rpoE, the gene encoding the second heat-shock sigma factor, sigma E, in Escherichia coli. The EMBO Journal. ,vol. 14, pp. 1032- 1042 ,(1995) , 10.1002/J.1460-2075.1995.TB07084.X
Mehmet A. Orman, Mark P. Brynildsen, Inhibition of stationary phase respiration impairs persister formation in E. coli Nature Communications. ,vol. 6, pp. 7983- 7983 ,(2015) , 10.1038/NCOMMS8983
S P Cohen, H Hächler, S B Levy, Genetic and functional analysis of the multiple antibiotic resistance (mar) locus in Escherichia coli. Journal of Bacteriology. ,vol. 175, pp. 1484- 1492 ,(1993) , 10.1128/JB.175.5.1484-1492.1993
V. Besnard, M. Federighi, J.M. Cappelier, Development of a direct viable count procedure for the investigation of VBNC state in Listeria monocytogenes. Letters in Applied Microbiology. ,vol. 31, pp. 77- 81 ,(2000) , 10.1046/J.1472-765X.2000.00771.X
Claire Dartigalongue, Dominique Missiakas, Satish Raina, Characterization of the Escherichia coli sigma E regulon. Journal of Biological Chemistry. ,vol. 276, pp. 20866- 20875 ,(2001) , 10.1074/JBC.M100464200
D. Pinto, V. Almeida, M. Almeida Santos, L. Chambel, Resuscitation of Escherichia coli VBNC cells depends on a variety of environmental or chemical stimuli Journal of Applied Microbiology. ,vol. 110, pp. 1601- 1611 ,(2011) , 10.1111/J.1365-2672.2011.05016.X
Aditi Kanhere, Manju Bansal, A novel method for prokaryotic promoter prediction based on DNA stability BMC Bioinformatics. ,vol. 6, pp. 1- 10 ,(2005) , 10.1186/1471-2105-6-1
Junho Cho, Janet Rogers, Mark Kearns, Macall Leslie, Steven D Hartson, Kevin S Wilson, None, Escherichia coli persister cells suppress translation by selectively disassembling and degrading their ribosomes Molecular Microbiology. ,vol. 95, pp. 352- 364 ,(2015) , 10.1111/MMI.12884
Nicholas C. Butzin, Philip Hochendoner, Curtis T. Ogle, Paul Hill, William H. Mather, Marching along to an Offbeat Drum: Entrainment of Synthetic Gene Oscillators by a Noisy Stimulus ACS Synthetic Biology. ,vol. 5, pp. 146- 153 ,(2016) , 10.1021/ACSSYNBIO.5B00127