Molecular detection of cell line cross-contaminations using amplified fragment length polymorphism DNA fingerprinting technology

作者: E. Milanesi , P. Ajmone-Marsan , E. Bignotti , M. N. Losio , J. Bernardi

DOI: 10.1007/S11626-003-0006-Z

关键词:

摘要: We have tested amplified fragment length polymorphism (AFLP) technology, in comparison with isoenzyme analysis, for the simultaneous detection of inter- and intraspecific cell line cross-contaminations (CCCs) collection held at Istituto Zooprofilattico della Lombardia e dell'Emilia Romagna. Isoenzyme analysis identified four cases interspecific CCCs. In a single experiment, AFLP was able to identify species origin all lines which reference genomic deoxyribonucleic acid available detect five contaminations. Four CCCs confirmed data on isoenzymes, whereas fifth CCC detected noninformative. addition, putative source contaminations detected. The utility technology depends number that be distinguished specific availability highly informative fingerprinting systems. mice, primer pair produced 16 polymorphisms 15 strains mouse analyzed. humans, 18 AFLPs 83 different profiles 159 Amplified can conveniently applied hypervariable markers are not available. multiplex microsatellite is available, still provide useful cheap tool simultaneously testing

参考文章(41)
Beth L. Roman, Van N. Pham, Paul E. Bennett, Brant M. Weinstein, Non-Radioisotopic AFLP Method Using PCR Primers Fluorescently Labeled with Cy™5 BioTechniques. ,vol. 26, pp. 236- 238 ,(1999) , 10.2144/99262BM11
Alonso Suazo, H. Glenn Hall, Modification of the AFLP protocol applied to honey bee (Apis mellifera L.) DNA. BioTechniques. ,vol. 26, pp. 704- 709 ,(1999) , 10.2144/99264ST07
Nishizaki C, Matsuo Y, Drexler Hg, Efficient DNA fingerprinting method for the identification of cross-culture contamination of cell lines. Human Cell. ,vol. 12, pp. 149- ,(1999)
B M Kacinski, B L King, J Berenson, A Lichtenstein, A polymerase chain reaction-based microsatellite typing assay used for tumor cell line identification. American Journal of Pathology. ,vol. 144, pp. 486- 491 ,(1994)
Jørgen Fogh, Contamination in Tissue Culture ,(1973)
Jacob B. Buntjer, Johannes A. Lenstra, Frederik W. Janssen, On the origin of meat - DNA techniques for species identification in meat products Veterinary Sciences Tomorrow. ,(2001)
Rolf Meyer, Christiane Höfelein, Jürg Lüthy, Urs Candrian, Polymerase Chain Reaction–Restriction Fragment Length Polymorphism Analysis: A Simple Method for Species Identification in Food Journal of AOAC International. ,vol. 78, pp. 1542- 1551 ,(1995) , 10.1093/JAOAC/78.6.1542
W. Nelson-Rees, D. Daniels, R. Flandermeyer, Cross-contamination of cells in culture Science. ,vol. 212, pp. 446- 452 ,(1981) , 10.1126/SCIENCE.6451928
Sunao Lyoda, Akihito Wada, Jeniffer Weller, Susan J. A. Flood, Edgar Schreiber, Bill Tucker, Haruo Watanabe, Evaluation of AFLP, a high-resolution DNA fingerprinting method, as a tool for molecular subtyping of enterohemorrhagic Escherichia coli O157:H7 isolates. Microbiology and Immunology. ,vol. 43, pp. 803- 806 ,(1999) , 10.1111/J.1348-0421.1999.TB02473.X