Overexpression, purification, and characterization of recombinant T4 gene 32 protein22-301 (g32P-B).

作者: D P Giedroc , R Khan , K Barnhart

DOI: 10.1016/S0021-9258(19)38418-2

关键词:

摘要: Gene 32 protein (g32P), the replication accessory from bacteriophage T4, is a zinc metalloprotein which binds with high cooperativity to single-stranded (ss) nucleic acids. The basic N-terminal 21 amino acids (termed "B" domain) required for highly cooperative (omega approximately 500) binding of g32P monomers ss As part our studies systematically evaluate structural features B domain important binding, homogeneous source noncooperatively = 1) and devoid contamination by native needed. Herein, we describe large-scale overexpression purification recombinant lacking tryptic (residues 1-21), designated g32P-B, as well its physiochemical acid properties. G32P-B readily purified soluble fraction Escherichia coli BL21 (DE3) transformed plasmid pT7g32-B.wt contains g32P-B coding sequences under inducible transcriptional control T7 RNA polymerase. Anion exchange, ssDNA-cellulose phenyl-Sepharose chromatographies give rise free contaminating acid. Recombinant has expected primary structure stoichiometric Zn(II). It also globular shown 1H NMR spectroscopy, hydrodynamic measurements, ability selectively remove carboxyl-terminal "A" form trypsin-resistant g32P-(A + B) DNA-binding core fragment. Quantitative experiments poly(dT) (0.05 M NaCl, pH 8.1, 20 degrees C) show that all equilibrium isotherms can be fit omega 1 Kobs 5.2 (+/- 1.6) x 10(5) M-1, moderate electrostatic component energy, delta log Kobs/delta log[NaCl] -3.0 +/- 0.2. Under identical solution conditions, derived expected, but an 80-fold higher apparent affinity, 4.0 2.0) 10(7) detectable enhanced salt sensitivity, -3.9 0.3. concentration raised, relative difference in between gradually reduced such extrapolation log-log plots Na+ standard state gives similar within experimental error. Qualitatively observations are found upon ribohomopolymer, poly(U).(ABSTRACT TRUNCATED AT 400 WORDS)

参考文章(40)
David P. Giedroc, Bruce A. Johnson, Ian M. Armitage, Joseph E. Coleman, NMR spectroscopy of 113Cd(II)-substituted gene 32 protein. Biochemistry. ,vol. 28, pp. 2410- 2418 ,(1989) , 10.1021/BI00432A011
M. Bittner, R.L. Burke, B.M. Alberts, Purification of the T4 gene 32 protein free from detectable deoxyribonuclease activities. Journal of Biological Chemistry. ,vol. 254, pp. 9565- 9572 ,(1979) , 10.1016/S0021-9258(19)83553-6
John W. Newport, Nils Lonberg, Stephen C. Kowalczykowski, Peter H. von Hippel, Interactions of bacteriophage T4-coded gene 32 protein with nucleic acids: II. Specificity of binding to DNA and RNA Journal of Molecular Biology. ,vol. 145, pp. 105- 121 ,(1981) , 10.1016/0022-2836(81)90336-3
E K Spicer, K R Williams, W H Konigsberg, T4 gene 32 protein trypsin-generated fragments. Fluorescence measurement of DNA-binding parameters. Journal of Biological Chemistry. ,vol. 254, pp. 6433- 6436 ,(1979) , 10.1016/S0021-9258(18)50385-9
J Rush, T C Lin, M Quinones, E K Spicer, I Douglas, K R Williams, W H Konigsberg, The 44P subunit of the T4 DNA polymerase accessory protein complex catalyzes ATP hydrolysis. Journal of Biological Chemistry. ,vol. 264, pp. 10943- 10953 ,(1989) , 10.1016/S0021-9258(18)60410-7
K.R. Williams, M.B. LoPresti, M. Setoguchi, Primary structure of the bacteriophage T4 DNA helix-destabilizing protein. Journal of Biological Chemistry. ,vol. 256, pp. 1754- 1762 ,(1981) , 10.1016/S0021-9258(19)69872-8
Nils Lonberg, Stephen C. Kowalczykowski, Leland S. Paul, Peter H. von Hippel, Interactions of bacteriophage T4-coded gene 32 protein with nucleic acids. III. Binding properties of two specific proteolytic digestion products of the protein (G32P*I and G32P*III). Journal of Molecular Biology. ,vol. 145, pp. 123- 138 ,(1981) , 10.1016/0022-2836(81)90337-5
R.L. Burke, B.M. Alberts, J. Hosoda, Proteolytic removal of the COOH terminus of the T4 gene 32 helix-destabilizing protein alters the T4 in vitro replication complex. Journal of Biological Chemistry. ,vol. 255, pp. 11484- 11493 ,(1980) , 10.1016/S0021-9258(19)70317-2
K.R. Williams, W. Konigsberg, Structural changes in the T4 gene 32 protein induced by DNA polynucleotides. Journal of Biological Chemistry. ,vol. 253, pp. 2463- 2470 ,(1978) , 10.1016/S0021-9258(17)38096-1