Issues in searching molecular sequence databases.

作者: Stephen F. Altschul , Mark S. Boguski , Warren Gish , John C. Wootton

DOI: 10.1038/NG0294-119

关键词:

摘要: … Sequence similarity search programs are versatile tools for the … sequence regions, the nature and extent of sequence redundancy in the databases and network access to similarity …

参考文章(90)
H. Miyoshi, T. Kozu, K. Shimizu, K. Enomoto, N. Maseki, Y. Kaneko, N. Kamada, M. Ohki, The t(8;21) translocation in acute myeloid leukemia results in production of an AML1-MTG8 fusion transcript. The EMBO Journal. ,vol. 12, pp. 2715- 2721 ,(1993) , 10.1002/J.1460-2075.1993.TB05933.X
J.L. Risler, M.O. Delorme, H. Delacroix, A. Henaut, Amino acid substitutions in structurally related proteins a pattern recognition approach: Determination of a new and efficient scoring matrix Journal of Molecular Biology. ,vol. 204, pp. 1019- 1029 ,(1988) , 10.1016/0022-2836(88)90058-7
G P Owens, W E Hahn, J J Cohen, Identification of mRNAs associated with programmed cell death in immature thymocytes. Molecular and Cellular Biology. ,vol. 11, pp. 4177- 4188 ,(1991) , 10.1128/MCB.11.8.4177
On the PAM matrix model of protein evolution. Molecular Biology and Evolution. ,vol. 2, pp. 434- 447 ,(1985) , 10.1093/OXFORDJOURNALS.MOLBEV.A040360
J B Clegg, A J Boyce, R M Harding, The evolution of tandemly repetitive DNA: recombination rules. Genetics. ,vol. 132, pp. 847- 859 ,(1992) , 10.1093/GENETICS/132.3.847
Peter Salamon, John C. Wootton, Andrzej K. Konopka, Lars K. Hansen, On the robustness of maximum entropy relationships for complexity distributions of nucleotide sequences Computational Biology and Chemistry. ,vol. 17, pp. 135- 148 ,(1993) , 10.1016/0097-8485(93)85005-W
Alan J. Bleasby, John C. Wootton, Construction of validated, non-redundant composite protein sequence databases Protein Engineering. ,vol. 3, pp. 153- 159 ,(1990) , 10.1093/PROTEIN/3.3.153
S. Karlin, S. F. Altschul, Applications and statistics for multiple high-scoring segments in molecular sequences. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 90, pp. 5873- 5877 ,(1993) , 10.1073/PNAS.90.12.5873