Computational neurogenetic modeling: integration of spiking neural networks, gene networks, and signal processing techniques

作者: L. Benuskova , N. Kasabov , S.G. Wysoski

DOI: 10.1007/11550907_80

关键词:

摘要: The paper presents a theory and new generic computational model of biologically plausible artificial neural network (ANN) that can mimic certain brain neuronal ensembles, the dynamics which is influenced by internal gene regulatory networks (GRN). We call these models "computational neurogenetic models" (CNGM) this area research neurogenetics. are aiming at developing novel modeling paradigm also bringing original insights into how genes their interactions influence function in normal diseased states. Both activity an ANN be analyzed using same signal processing techniques then compared. In proposed model, FFT spectral characteristics behavior compared with EEG signal. will include large set parameters functions related to genes/proteins, spiking activities, etc., define GRN corresponding ANN. These optimized, based for instance on targeted data, through evolutionary algorithms. offers list open questions field CNGM. It outlines directions further research.

参考文章(15)
Wulfram Gerstner, Werner Kistler, Spiking Neuron Models: An Introduction Cambridge University Press. ,(2002)
Harvey F. Lodish, Molecular Cell Biology ,(1986)
W. Gerstner, Spiking Neuron Models Reference Module in Neuroscience and Biobehavioral Psychology#R##N#Encyclopedia of Neuroscience. pp. 277- 280 ,(2002) , 10.1016/B978-008045046-9.01405-4
Yuekui Li, Jianzhong Wang, Jin G. Sheng, Ling Liu, Steven W. Barger, Richard A. Jones, Linda J. Van Eldik, Robert E. Mrak, W. Sue T. Griffin, S100β Increases Levels of β-Amyloid Precursor Protein and Its Encoding mRNA in Rat Neuronal Cultures Journal of Neurochemistry. ,vol. 71, pp. 1421- 1428 ,(2002) , 10.1046/J.1471-4159.1998.71041421.X
Ingo C. Kleppe, Hugh P.C. Robinson, Determining the Activation Time Course of Synaptic AMPA Receptors from Openings of Colocalized NMDA Receptors Biophysical Journal. ,vol. 77, pp. 1418- 1427 ,(1999) , 10.1016/S0006-3495(99)76990-0
L. F. A. WESSELS, E. P. VAN SOMEREN, M. J. T. REINDERS, A comparison of genetic network models. pacific symposium on biocomputing. pp. 508- 519 ,(2000) , 10.1142/9789814447362_0049
Miklos Toth, Joseph Grimsby, Gyorgy Buzsaki, Gerald P. Donovan, Epileptic seizures caused by inactivation of a novel gene, jerky, related to centromere binding protein-B in transgenic mice. Nature Genetics. ,vol. 11, pp. 71- 75 ,(1995) , 10.1038/NG0995-71
Arie Steven Jacoby, Yvonne Janet Hort, George Constantinescu, John Shine, Tiina Pauline Iismaa, Critical role for GALR1 galanin receptor in galanin regulation of neuroendocrine function and seizure activity Molecular Brain Research. ,vol. 107, pp. 195- 200 ,(2002) , 10.1016/S0169-328X(02)00451-5
Sylwia Zagulska-Szymczak, Robert K. Filipkowski, Leszek Kaczmarek, Kainate-induced genes in the hippocampus: lessons from expression patterns Neurochemistry International. ,vol. 38, pp. 485- 501 ,(2001) , 10.1016/S0197-0186(00)00101-7
N. Kasabov, L. Benuskova, S.G. Wysoski, Computational neurogenetic modelling: gene networks within neural networks international joint conference on neural network. ,vol. 2, pp. 1203- 1208 ,(2004) , 10.1109/IJCNN.2004.1380113