Novel 2-D graphical representation of DNA sequences and their numerical characterization
作者： Milan Randić , Marjan Vračko , Nella Lerš , Dejan Plavšić
DOI: 10.1016/S0009-2614(02)01784-0
关键词:
摘要: We consider a novel 2-D graphical representation of DNA sequences preserving information on sequential adjacency bases and allowing numerical characterization. The avoids loss accompanying alternative representations in which the curve standing for overlaps intersects itself. method is illustrated coding sequence first exon human β-globin gene.
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sci-hub.se 参考文章(11)
From chemical topology to three-dimensional geometry Plenum Press. ,(2002) , 10.1007/B114209
Gerald M. Maggiora, Mark A. Johnson, Concepts and applications of molecular similarity Wiley. ,(1990)
M. Randić, M. Vračko, A. Nandy, S. C. Basak, On 3-D graphical representation of DNA primary sequences and their numerical characterization. Journal of Chemical Information and Computer Sciences. ,vol. 40, pp. 1235- 1244 ,(2000) , 10.1021/CI000034Q
Milan Randić, Goran Krilov, None, ON A CHARACTERIZATION OF THE FOLDING OF PROTEINS International Journal of Quantum Chemistry. ,vol. 75, pp. 1017- 1026 ,(1999) , 10.1002/(SICI)1097-461X(1999)75:6<1017::AID-QUA6>3.0.CO;2-C
A Roy, C Raychaudhury, A Nandy, None, Novel techniques of graphical representation and analysis of DNA sequences—A review Journal of Biosciences. ,vol. 23, pp. 55- 71 ,(1998) , 10.1007/BF02728525
Milan Randic, Alexander F. Kleiner, Luz M. De Alba, Distance/Distance Matrixes Journal of Chemical Information and Computer Sciences. ,vol. 34, pp. 277- 286 ,(1994) , 10.1021/CI00018A008
John Owen Ward, Percy Alfred Scholes, The Oxford Companion to Music ,(1938)
A. Nandy, A new graphical representation and analysis of DNA sequence structure. I: Methodology and application to globin genes Current Science. ,vol. 66, pp. 309- 314 ,(1994)
Hamori E, Graphic representation of long DNA sequences by the method of H curves--current results and future aspects. BioTechniques. ,vol. 7, pp. 710- ,(1989)
Paul von R. Schleyer, Encyclopedia of computational chemistry John Wiley & Sons. ,(1998)