Collegiate athlete brain data for white matter mapping and network neuroscience

作者: Bradley Caron , Ricardo Stuck , Brent McPherson , Daniel Bullock , Lindsey Kitchell

DOI: 10.1101/2020.08.25.267005

关键词:

摘要: We describe a dataset of processed data with associated reproducible preprocessing pipeline collected from two collegiate athlete groups and one non-athlete group. The shares minimally diffusion-weighted magnetic resonance imaging (dMRI) data, three models the diffusion signal in voxel, full-brain tractograms, segmentation major white matter tracts as well structural connectivity matrices. There is currently paucity similar datasets openly shared. Furthermore, challenges are collecting this type data. derivatives shared here can be used reference to study effects long-term exposure athletics, such repetitive head impacts. use advanced anatomical dMRI processing methods publicly available web services at brainlife.io.

参考文章(96)
Derek Kellar, Sharlene Newman, Franco Pestilli, Hu Cheng, Nicholas L. Port, Comparing fMRI activation during smooth pursuit eye movements among contact sport athletes, non-contact sport athletes, and non-athletes. NeuroImage: Clinical. ,vol. 18, pp. 413- 424 ,(2018) , 10.1016/J.NICL.2018.01.025
Jenin El-Sayes, Diana Harasym, Claudia V. Turco, Mitchell B. Locke, Aimee J. Nelson, Exercise-Induced Neuroplasticity: A Mechanistic Model and Prospects for Promoting Plasticity. The Neuroscientist. ,vol. 25, pp. 65- 85 ,(2019) , 10.1177/1073858418771538
Matteo Bastiani, Michiel Cottaar, Sean P. Fitzgibbon, Sana Suri, Fidel Alfaro-Almagro, Stamatios N. Sotiropoulos, Saad Jbabdi, Jesper L.R. Andersson, Automated quality control for within and between studies diffusion MRI data using a non-parametric framework for movement and distortion correction. NeuroImage. ,vol. 184, pp. 801- 812 ,(2019) , 10.1016/J.NEUROIMAGE.2018.09.073
Laura Chaddock-Heyman, Kirk I. Erickson, Caitlin Kienzler, Eric S. Drollette, Lauren B. Raine, Shih-Chun Kao, Jeanine Bensken, Robert Weisshappel, Darla M. Castelli, Charles H. Hillman, Arthur F. Kramer, Physical Activity Increases White Matter Microstructure in Children. Frontiers in Neuroscience. ,vol. 12, pp. 950- ,(2018) , 10.3389/FNINS.2018.00950
Irene Esteban-Cornejo, Maria Rodriguez-Ayllon, Juan Verdejo-Roman, Cristina Cadenas-Sanchez, Jose Mora-Gonzalez, Laura Chaddock-Heyman, Lauren B. Raine, Chelsea M. Stillman, Arthur F. Kramer, Kirk I. Erickson, Andrés Catena, Francisco B. Ortega, Charles H. Hillman, Physical Fitness, White Matter Volume and Academic Performance in Children: Findings From the ActiveBrains and FITKids2 Projects. Frontiers in Psychology. ,vol. 10, pp. 208- ,(2019) , 10.3389/FPSYG.2019.00208
Ivo D Dinov Dinov, Franco Pestilli Pestilli, Daniel Bullock Bullock, Paolo Avesani Avesani, Paolo Avesani, Andrew Patterson Patterson, Olaf Sporns Sporns, Eleftherios Garyfallidis Garyfallidis, Lei Wang Wang, Robert Henschel Henschel, Soichi Hayashi Hayashi, David Y Hancock Hancock, Yiming Qian Qian, Bradley Caron Caron, Brent McPherson McPherson, Cesar F Caiafa Caiafa, Cesar F Caiafa, Lindsey Kitchell Kitchell, Andrew J Saykin Saykin, Emanuele Olivetti Olivetti, Emanuele Olivetti, The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services Scientific Data. ,vol. 6, pp. 69- ,(2019) , 10.1038/S41597-019-0073-Y
Krzysztof J. Gorgolewski, Tibor Auer, Vince D. Calhoun, R. Cameron Craddock, Samir Das, Eugene P. Duff, Guillaume Flandin, Satrajit S. Ghosh, Tristan Glatard, Yaroslav O. Halchenko, Daniel A. Handwerker, Michael Hanke, David Keator, Xiangrui Li, Zachary Michael, Camille Maumet, B. Nolan Nichols, Thomas E. Nichols, John Pellman, Jean-Baptiste Poline, Ariel Rokem, Gunnar Schaefer, Vanessa Sochat, William Triplett, Jessica A. Turner, Gaël Varoquaux, Russell A. Poldrack, The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data. ,vol. 3, pp. 160044- 160044 ,(2016) , 10.1038/SDATA.2016.44
Elias Kellner, Bibek Dhital, Valerij G. Kiselev, Marco Reisert, Gibbs-ringing artifact removal based on local subvoxel-shifts. Magnetic Resonance in Medicine. ,vol. 76, pp. 1574- 1581 ,(2016) , 10.1002/MRM.26054
Daniel Bullock, Hiromasa Takemura, Cesar F. Caiafa, Lindsey Kitchell, Brent McPherson, Bradley Caron, Franco Pestilli, Associative white matter connecting the dorsal and ventral posterior human cortex Brain Structure & Function. ,vol. 224, pp. 2631- 2660 ,(2019) , 10.1007/S00429-019-01907-8
J-Donald Tournier, Robert Smith, David Raffelt, Rami Tabbara, Thijs Dhollander, Maximilian Pietsch, Daan Christiaens, Ben Jeurissen, Chun-Hung Yeh, Alan Connelly, MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation NeuroImage. ,vol. 202, pp. 116137- ,(2019) , 10.1016/J.NEUROIMAGE.2019.116137