Integrated Computational and Experimental Platform for Characterizing Protein Isoforms and PTMs in Microbial Systems by Top-Down FT-ICR Mass Spectrometry

David M. Horn, Roman A. Zubarev, Fred W. McLafferty, Automated reduction and interpretation of high resolution electrospray mass spectra of large molecules. Journal of the American Society for Mass Spectrometry. ,vol. 11, pp. 320- 332 ,(2000) , 10.1016/S1044-0305(99)00157-9

Andrew J. Link, Jimmy Eng, David M. Schieltz, Edwin Carmack, Gregory J. Mize, David R. Morris, Barbara M. Garvik, John R. Yates, Direct analysis of protein complexes using mass spectrometry Nature Biotechnology. ,vol. 17, pp. 676- 682 ,(1999) , 10.1038/10890

C S Harwood, J Gibson, Anaerobic and aerobic metabolism of diverse aromatic compounds by the photosynthetic bacterium Rhodopseudomonas palustris. Applied and Environmental Microbiology. ,vol. 54, pp. 712- 717 ,(1988) , 10.1128/AEM.54.3.712-717.1988

Fanyu Meng, Benjamin J. Cargile, Leah M. Miller, Andrew J. Forbes, Jeffrey R. Johnson, Neil L. Kelleher, Informatics and multiplexing of intact protein identification in bacteria and the archaea Nature Biotechnology. ,vol. 19, pp. 952- 957 ,(2001) , 10.1038/NBT1001-952

Sudip K. Samanta, Caroline S. Harwood, Use of the Rhodopseudomonas palustris genome sequence to identify a single amino acid that contributes to the activity of a coenzyme A ligase with chlorinated substrates Molecular Microbiology. ,vol. 55, pp. 1151- 1159 ,(2004) , 10.1111/J.1365-2958.2004.04452.X

Susan E. Martin, Jeffrey Shabanowitz, Donald F. Hunt, Jarrod A. Marto, Subfemtomole MS and MS/MS Peptide Sequence Analysis Using Nano-HPLC Micro-ESI Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Analytical Chemistry. ,vol. 72, pp. 4266- 4274 ,(2000) , 10.1021/AC000497V

Karl Forchhammer, Andrea Hedler, Heike Strobel, Verena Weiss, Heterotrimerization of PII-like signalling proteins: implications for PII-mediated signal transduction systems. Molecular Microbiology. ,vol. 33, pp. 338- 349 ,(1999) , 10.1046/J.1365-2958.1999.01477.X

Michelle V. Buchanan, Frank W. Larimer, H. Steven Wiley, Steve J. Kennel, Thomas J. Squier, J. Michael Ramsey, Karin D. Rodland, Gregory B. Hurst, Richard D. Smith, Ying Xu, David Dixon, Mitchel J. Doktycz, Steve Colson, Ray Gesteland, Carol Giometti, Malin Young, Michael Giddings, Genomes to Life''Center for Molecular and Cellular Systems'': A research program for identification and characterization of protein complexes. Omics A Journal of Integrative Biology. ,vol. 6, pp. 287- 303 ,(2002) , 10.1089/153623102321112737

Tomoaki Uchiki, Robert Hettich, Vibha Gupta, Chris Dealwis, Characterization of monomeric and dimeric forms of recombinant Sml1p-histag protein by electrospray mass spectrometry. Analytical Biochemistry. ,vol. 301, pp. 35- 48 ,(2002) , 10.1006/ABIO.2001.5492

Ashley L. McCormack, David M. Schieltz, Bruce Goode, Shirley Yang, Georjana Barnes, David Drubin, John R. Yates, Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low-femtomole level. Analytical Chemistry. ,vol. 69, pp. 767- 776 ,(1997) , 10.1021/AC960799Q