Shape change in crystallization of biological macromolecules

作者: Peter G. Vekilov , Sungwook Chung , Katy N. Olafson

DOI: 10.1557/MRS.2016.87

关键词:

摘要: Conformational changes, and the formation of densely packed ordered aggregates or crystals, are behaviors that profoundly affect properties a molecule. Using example biological macromolecules, we discuss two types interactions between these behaviors. First, demonstrate shape change may be driven by crystallization if gain in free energy is sufficient to overcome transition an unfavorable molecular conformation. Hence, crystal structures flexible molecules poor representation their free-phase atomic arrangements. Second, with conformational variability, such as proteins, facilitate nucleation crystals forming dense liquid clusters enriched domain-swapped misassembled oligomers. In clusters, barrier reduced due lower surface crystal/dense interface, significantly faster.

参考文章(63)
Sung-Hou Kim, Dong Hae Shin, Jinyu Liu, Vaheh Oganesyan, Shengfeng Chen, Qian Steven Xu, Jeong-Sun Kim, Debanu Das, Ursula Schulze-Gahmen, Stephen R. Holbrook, Elizabeth L. Holbrook, Bruno A. Martinez, Natalia Oganesyan, Andy DeGiovanni, Yun Lou, Marlene Henriquez, Candice Huang, Jaru Jancarik, Ramona Pufan, In-Geol Choi, John-Marc Chandonia, Jingtong Hou, Barbara Gold, Hisao Yokota, Steven E. Brenner, Paul D. Adams, Rosalind Kim, Structural genomics of minimal organisms and protein fold space. Journal of Structural and Functional Genomics. ,vol. 6, pp. 63- 70 ,(2005) , 10.1007/S10969-005-2651-9
Zygmunt S. Derewenda, Peter G. Vekilov, Entropy and surface engineering in protein crystallization. Acta Crystallographica Section D-biological Crystallography. ,vol. 62, pp. 116- 124 ,(2006) , 10.1107/S0907444905035237
Ye Li, Vassiliy Lubchenko, Maria A. Vorontsova, Luis Filobelo, Peter G. Vekilov, Ostwald-like ripening of the anomalous mesoscopic clusters in protein solutions. Journal of Physical Chemistry B. ,vol. 116, pp. 10657- 10664 ,(2012) , 10.1021/JP303316S
Arne Almenningen, Otto Bastiansen, Liv Fernholt, Bjørg N. Cyvin, Sven J. Cyvin, Svein Samdal, Structure and barrier of internal rotation of biphenyl derivatives in the gaseous state: Part 1. The molecular structure and normal coordinate analysis of normal biphenyl and pedeuterated biphenyl Journal of Molecular Structure. ,vol. 128, pp. 59- 76 ,(1985) , 10.1016/0022-2860(85)85041-9
A. A. Chernov, H. Komatsu, Principles of Crystal Growth in Protein Crystallization Springer, Dordrecht. pp. 329- 353 ,(1995) , 10.1007/978-94-011-0137-0_24
W. E. Royer, Structures of Red Blood Cell Hemoglobins Blood and Tissue Oxygen Carriers. pp. 87- 116 ,(1992) , 10.1007/978-3-642-76418-9_4
Peter G. Vekilov, Nucleation and Growth Mechanisms of Protein Crystals Handbook of Crystal Growth (Second Edition)#R##N#Fundamentals. pp. 795- 871 ,(2015) , 10.1016/B978-0-444-56369-9.00019-8
Charlotte P. Mangum, Blood and Tissue Oxygen Carriers ,(2011)