A novel variant in GLIS3 is associated with osteoarthritis

作者: Elisabetta Casalone , Ioanna Tachmazidou , Eleni Zengini , Konstantinos Hatzikotoulas , Sophie Hackinger

DOI: 10.1136/ANNRHEUMDIS-2017-211848

关键词:

摘要: Objectives Osteoarthritis (OA) is a complex disease, but its genetic aetiology remains poorly characterised. To identify novel susceptibility loci for OA, we carried out genome-wide association study (GWAS) in individuals from the largest UK-based OA collections to date. Methods We discovery GWAS 5414 with knee and/or hip total joint replacement (TJR) and 9939 population-based controls. followed-up prioritised variants subjects interim release of UK Biobank resource (up 12 658 cases 50 898 controls) our lead finding operated full (17 894 89 470 controls). investigated functional implications methylation, gene expression proteomics data primary chondrocytes 12 pairs intact degraded cartilage samples patients undergoing TJR. Results detect significant at rs10116772 TJR (P=3.7×10 −8 ; allele A: OR (95% CI) 0.97 (0.96 0.98)), an intronic variant GLIS3 , which expressed cartilage. Variants strong correlation have been associated elevated plasma glucose levels diabetes. Conclusions locus that has previously implicated diabetes glycaemic traits.

参考文章(20)
Unnur Styrkarsdottir, , Gudmar Thorleifsson, Hafdis T Helgadottir, Nils Bomer, Sarah Metrustry, S Bierma-Zeinstra, Annelieke M Strijbosch, Evangelos Evangelou, Deborah Hart, Marian Beekman, Aslaug Jonasdottir, Asgeir Sigurdsson, Finnur F Eiriksson, Margret Thorsteinsdottir, Michael L Frigge, Augustine Kong, Sigurjon A Gudjonsson, Olafur T Magnusson, Gisli Masson, Albert Hofman, Nigel K Arden, Thorvaldur Ingvarsson, Stefan Lohmander, Margreet Kloppenburg, Fernando Rivadeneira, Rob G H H Nelissen, Tim Spector, Andre Uitterlinden, P Eline Slagboom, Unnur Thorsteinsdottir, Ingileif Jonsdottir, Ana M Valdes, Ingrid Meulenbelt, Joyce van Meurs, Helgi Jonsson, Kari Stefansson, , Severe osteoarthritis of the hand associates with common variants within the ALDH1A2 gene and with rare variants at 1p31 Nature Genetics. ,vol. 46, pp. 498- 502 ,(2014) , 10.1038/NG.2957
Janan T. Eppig, Judith A. Blake, Carol J. Bult, James A. Kadin, Joel E. Richardson, , The Mouse Genome Database (MGD): facilitating mouse as a model for human biology and disease Nucleic Acids Research. ,vol. 43, pp. 726- 736 ,(2015) , 10.1093/NAR/GKU967
Valérie Senée, Claude Chelala, Sabine Duchatelet, Daorong Feng, Hervé Blanc, Jack-Christophe Cossec, Céline Charon, Marc Nicolino, Pascal Boileau, Douglas R Cavener, Pierre Bougnères, Doris Taha, Cécile Julier, Mutations in GLIS3 are responsible for a rare syndrome with neonatal diabetes mellitus and congenital hypothyroidism Nature Genetics. ,vol. 38, pp. 682- 687 ,(2006) , 10.1038/NG1802
Cathie Sudlow, John Gallacher, Naomi Allen, Valerie Beral, Paul Burton, John Danesh, Paul Downey, Paul Elliott, Jane Green, Martin Landray, Bette Liu, Paul Matthews, Giok Ong, Jill Pell, Alan Silman, Alan Young, Tim Sprosen, Tim Peakman, Rory Collins, UK biobank: an open access resource for identifying the causes of a wide range of complex diseases of middle and old age PLOS Medicine. ,vol. 12, ,(2015) , 10.1371/JOURNAL.PMED.1001779
Alvin C Lin, Brian L Seeto, Justyna M Bartoszko, Michael A Khoury, Heather Whetstone, Louisa Ho, Claire Hsu, S Amanda Ali, Benjamin A Alman, Modulating hedgehog signaling can attenuate the severity of osteoarthritis Nature Medicine. ,vol. 15, pp. 1421- 1425 ,(2009) , 10.1038/NM.2055
Timothy M Frayling, Nicholas J Timpson, Michael N Weedon, Eleftheria Zeggini, Rachel M Freathy, Cecilia M Lindgren, John RB Perry, Katherine S Elliott, Hana Lango, Nigel W Rayner, Beverley Shields, Lorna W Harries, Jeffrey C Barrett, Sian Ellard, Christopher J Groves, Bridget Knight, Ann-Marie Patch, Andrew R Ness, Shah Ebrahim, Debbie A Lawlor, Susan M Ring, Yoav Ben-Shlomo, Marjo-Riitta Jarvelin, Ulla Sovio, Amanda J Bennett, David Melzer, Luigi Ferrucci, Ruth JF Loos, Inês Barroso, Nicholas J Wareham, Fredrik Karpe, Katharine R Owen, Lon R Cardon, Mark Walker, Graham A Hitman, Colin NA Palmer, Alex SF Doney, Andrew D Morris, George Davey Smith, Andrew T Hattersley, Mark I McCarthy, None, A common variant in the FTO gene is associated with body mass index and predisposes to childhood and adult obesity Science. ,vol. 316, pp. 889- 894 ,(2007) , 10.1126/SCIENCE.1141634
Peter Lynn, Sample Design for Understanding Society Research Papers in Economics. ,(2009)
Kalliope Panoutsopoulou, Sarah Metrustry, Sally A Doherty, Laura L Laslett, Rose A Maciewicz, Deborah J Hart, Weiya Zhang, Kenneth R Muir, Margaret Wheeler, Cyrus Cooper, Tim D Spector, Flavia M Cicuttini, Graeme Jones, Nigel K Arden, Michael Doherty, Eleftheria Zeggini, Ana M Valdes, , The effect of FTO variation on increased osteoarthritis risk is mediated through body mass index: a mendelian randomisation study Annals of the Rheumatic Diseases. ,vol. 73, pp. 2082- 2086 ,(2014) , 10.1136/ANNRHEUMDIS-2013-203772