Integrating metabolomics and targeted gene expression to uncover potential biomarkers of fungal/oomycetes-associated disease susceptibility in grapevine.

作者: Marisa Maia , António E. N. Ferreira , Rui Nascimento , Filipa Monteiro , Francisco Traquete

DOI: 10.1038/S41598-020-72781-2

关键词:

摘要: Vitis vinifera, one of the most cultivated fruit crops, is susceptible to several diseases particularly caused by fungus and oomycete pathogens. In contrast, other species (American, Asian) display different degrees tolerance/resistance these pathogens, being widely used in breeding programs introgress resistance traits elite V. vinifera cultivars. Secondary metabolites are important players plant defence responses. Therefore, characterization metabolic profiles associated with disease susceptibility grapevine a promising approach identify trait-related biomarkers. this work, leaf composition eleven genotypes was analysed using an untargeted metabolomics approach. A total 190 putative were found discriminate resistant/partial resistant from genotypes. The biological relevance discriminative compounds assessed pathway analysis. Several selected as biomarkers expression genes coding for enzymes their pathways analysed. Reference established normalisation candidate gene expression. leucoanthocyanidin reductase 2 (LAR2) presented significant increase genotypes, accordance catechin accumulation analysis group. Up our knowledge first time that constitutive proposed, opening new insights into selection on programs.

参考文章(74)
R. Eibach, R. Töpfer, Traditional grapevine breeding techniques Grapevine Breeding Programs for the Wine Industry#R##N#Traditional and Molecular Techniques. pp. 3- 22 ,(2015) , 10.1016/B978-1-78242-075-0.00001-6
Andreas Kortekamp, E.v.a. Zyprian, Characterization ofPlasmopara-Resistance in grapevine usingin vitroplants Journal of Plant Physiology. ,vol. 160, pp. 1393- 1400 ,(2003) , 10.1078/0176-1617-01021
Oliver Fiehn, Metabolomics - the link between genotypes and phenotypes Plant Molecular Biology. ,vol. 48, pp. 155- 171 ,(2002) , 10.1023/A:1013713905833
Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe, Frank Speleman, Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes Genome Biology. ,vol. 3, pp. 1- 12 ,(2002) , 10.1186/GB-2002-3-7-RESEARCH0034
Daniel B. Niesen, Craig Hessler, Navindra P. Seeram, Beyond resveratrol: A review of natural stilbenoids identified from 2009–2013 Journal of Berry Research. ,vol. 3, pp. 181- 196 ,(2013) , 10.3233/JBR-130062
M.D. Fuster, J.A. del Río, A. Ortuño, A. Báidez, V. Frías, P. Gómez, Phenolic Compounds Have a Role in the Defence Mechanism Protecting Grapevine against the Fungi Involved in Petri Disease Phytopathologia Mediterranea. ,vol. 43, pp. 87- 94 ,(2004) , 10.1400/14577
Marianna Polesani, Luisa Bortesi, Alberto Ferrarini, Anita Zamboni, Marianna Fasoli, Claudia Zadra, Arianna Lovato, Mario Pezzotti, Massimo Delledonne, Annalisa Polverari, General and species-specific transcriptional responses to downy mildew infection in a susceptible (Vitis vinifera) and a resistant (V. riparia) grapevine species BMC Genomics. ,vol. 11, pp. 117- 117 ,(2010) , 10.1186/1471-2164-11-117
T. Sambandam, A. Mahadevan, Degradation of catechin and purification and partial characterization of catechin oxygenase fromChaetomium cupreum. World Journal of Microbiology & Biotechnology. ,vol. 9, pp. 37- 44 ,(1993) , 10.1007/BF00656513