Hypothesis building using the Animal Trait Ontology

作者: LaRon Maurice Hughes

DOI: 10.31274/RTD-180813-16860

关键词:

摘要: Ontologies help to identify and formally define the entities relationships in specific domains of interest. Bio-ontologies, particular, play a central role annotation, integration, analysis, interpretation biological data. Missing from number bioontologies is one that includes phenotypic trait information found livestock species. As result, Animal Trait Ontology (ATO) project being carried out under auspices USDA-National Genome Research Program aimed at development standardized ontology for farm animals software tools assist research community collaborative creation, editing, maintenance, use such an ontology. The ATO currently inclusive cattle, pig, chicken species, will include other species future. eventually be linked (e.g., human, rat, mouse) so comparative analysis can efficiently performed between

参考文章(44)
Pavana Polineni, Prathyusha Aragonda, Suresh R Xavier, Richard Furuta, David L Adelson, The bovine QTL viewer: a web accessible database of bovine Quantitative Trait Loci BMC Bioinformatics. ,vol. 7, pp. 283- 283 ,(2006) , 10.1186/1471-2105-7-283
John M. Greally, Genomics: Encyclopaedia of humble DNA Nature. ,vol. 447, pp. 782- 783 ,(2007) , 10.1038/447782A
G. Yue, A. Stratil, S. Cepica, J. Schroffel, D. Schroffelova, L. Fontanesi, M. Cagnazzo, G. Moser, H. Bartenschlager, G. Reiner, H. Geldermann, Linkage and QTL mapping for Sus scrofa chromosome 7 Journal of Animal Breeding and Genetics. ,vol. 120, pp. 56- 65 ,(2003) , 10.1046/J.0931-2668.2003.00424.X
T. Keokamnerd, J.C. Acton, I.Y. Han, P.L. Dawson, Effect of Ethanol Rinse, Lactobacillus fermentum Inoculation, and Modified Atmosphere on Ground Chicken Meat Quality Poultry Science. ,vol. 86, pp. 1424- 1430 ,(2007) , 10.1093/PS/86.7.1424
O. Arnaiz, S. Cain, J. Cohen, L. Sperling, ParameciumDB: a community resource that integrates the Paramecium tetraurelia genome sequence with genetic data Nucleic Acids Research. ,vol. 35, pp. 439- 444 ,(2007) , 10.1093/NAR/GKL777
John L. Hamerton, IVth International Workshop on Human Gene Mapping Human Genetics. ,vol. 36, ,(1977) , 10.1007/BF00446289
K. S. Kim, J. J. Lee, H. Y. Shin, B. H. Choi, C. K. Lee, J. J. Kim, B. W. Cho, T.-H. Kim, Association of melanocortin 4 receptor (MC4R) and high mobility group AT‐hook 1 (HMGA1) polymorphisms with pig growth and fat deposition traits Animal Genetics. ,vol. 37, pp. 419- 421 ,(2006) , 10.1111/J.1365-2052.2006.01482.X