Differential regulation of genomic imprinting by TET proteins in embryonic stem cells

作者: Lizhi Liu , Shi-Qing Mao , Chelsea Ray , Yu Zhang , Fong T. Bell

DOI: 10.1016/J.SCR.2015.08.010

关键词:

摘要: TET proteins have been found to play an important role in active demethylation at CpG sites mammals. There are some reports implicating their functions removal of DNA methylation imprint the imprinted regions germline. However, it is not well established whether can also be involved embryonic stem (ES) cells. Here we report that loss caused a significant increase Igf2-H19 region ES We observed variable Peg1 clones devoid proteins, particular differentiated By contrast, did observe Peg3, Snrpn and Dlk1-Dio3 cells lacking proteins. Interestingly, result embryoid bodies (EB). Therefore, seem differentially maintaining subset EBs.

参考文章(67)
Cindy A. Eads, Peter W. Laird, Combined Bisulfite Restriction Analysis (COBRA) Methods of Molecular Biology. ,vol. 200, pp. 71- 86 ,(2002) , 10.1385/1-59259-182-5:071
Wolf Reik, Wendy Dean, Jorn Walter, Epigenetic Reprogramming in Mammalian Development Science. ,vol. 293, pp. 1089- 1093 ,(2001) , 10.1126/SCIENCE.1063443
C. P. Walsh, G. L. Xu, Cytosine methylation and DNA repair Current Topics in Microbiology and Immunology. ,vol. 301, pp. 283- 315 ,(2006) , 10.1007/3-540-31390-7_11
Ittai Ben-Porath, Howard Cedar, Imprinting: focusing on the center. Current Opinion in Genetics & Development. ,vol. 10, pp. 550- 554 ,(2000) , 10.1016/S0959-437X(00)00126-X
Yonatan Stelzer, Ido Sagi, Ofra Yanuka, Rachel Eiges, Nissim Benvenisty, The noncoding RNA IPW regulates the imprinted DLK1 - DIO3 locus in an induced pluripotent stem cell model of Prader-Willi syndrome Nature Genetics. ,vol. 46, pp. 551- 557 ,(2014) , 10.1038/NG.2968
Shinpei Yamaguchi, Li Shen, Yuting Liu, Damian Sendler, Yi Zhang, Role of Tet1 in erasure of genomic imprinting Nature. ,vol. 504, pp. 460- 464 ,(2013) , 10.1038/NATURE12805
Toshinobu Nakamura, Yu-Jung Liu, Hiroyuki Nakashima, Hiroki Umehara, Kimiko Inoue, Shogo Matoba, Makoto Tachibana, Atsuo Ogura, Yoichi Shinkai, Toru Nakano, PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos Nature. ,vol. 486, pp. 415- 419 ,(2012) , 10.1038/NATURE11093
Toshinobu Nakamura, Yoshikazu Arai, Hiroki Umehara, Masaaki Masuhara, Tohru Kimura, Hisaaki Taniguchi, Toshihiro Sekimoto, Masahito Ikawa, Yoshihiro Yoneda, Masaru Okabe, Satoshi Tanaka, Kunio Shiota, Toru Nakano, PGC7/Stella protects against DNA demethylation in early embryogenesis Nature Cell Biology. ,vol. 9, pp. 64- 71 ,(2007) , 10.1038/NCB1519
Bernhard Payer, Mitinori Saitou, Sheila C. Barton, Rosemary Thresher, John P.C. Dixon, Dirk Zahn, William H. Colledge, Mark B.L. Carlton, Toru Nakano, M.Azim Surani, Stella is a maternal effect gene required for normal early development in mice. Current Biology. ,vol. 13, pp. 2110- 2117 ,(2003) , 10.1016/J.CUB.2003.11.026