Force Field for 3’-CMP and Vibrational Spectra

作者: M. Campos , G. Diaz , A. Hernanz , R. Navarro

DOI: 10.1007/978-94-011-0371-8_127

关键词:

摘要: The assignment of the vibrational spectra mononucleotides cannot be established without difficulties. Nevertheless, in our opinion, this is first goal to get if you study interactions between and different molecules by spectroscopy, like it case. In way, we are using classical molecular mechanics, semiempirical and/or ab initio methods, depending molecule, order obtain a normal coordinate analysis that help us its assignment.

参考文章(7)
H. Susi, J.S. Ard, Vibrational spectra of nucleic acid constituents—I Spectrochimica Acta Part A: Molecular Spectroscopy. ,vol. 27, pp. 1549- 1562 ,(1971) , 10.1016/0584-8539(71)80211-8
James M. Eyster, Earl W. Prohofsky, The normal vibrations of tetrahydrofuran and its deuterated derivatives Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy. ,vol. 30, pp. 2041- 2046 ,(1974) , 10.1016/0584-8539(74)80055-3
I.N. Chakraborty, R.A. Condrate, J.R. Ferraro, C.F. Chenuit, The vibrational spectra and normal coordinate analyses of cubic and monoclinic SiP2O7 Journal of Solid State Chemistry. ,vol. 68, pp. 94- 105 ,(1987) , 10.1016/0022-4596(87)90289-1
B. F. Putnam, L. L. Van Zandt, Planar and nonplanar vibrations of cytosine Journal of Computational Chemistry. ,vol. 3, pp. 305- 316 ,(1982) , 10.1002/JCC.540030305
Andrzej Jaworski, Marian Szczesniak, Krystyna Szczepaniak, Kuhalim Kubulat, Willis B. Person, Infrared spectra and tautomerism of 5-fluorocytosine, 5-bromocytosine and 5-iodocytosine. Matrix isolation and theoretical AB initio studies Journal of Molecular Structure. ,vol. 223, pp. 63- 92 ,(1990) , 10.1016/0022-2860(90)80461-R
Charles E. Bugg, Richard E. Marsh, Structure of the monoclinic form of cytidylic acid b. Journal of Molecular Biology. ,vol. 25, pp. 67- 82 ,(1967) , 10.1016/0022-2836(67)90279-3
Jos� M. Orza, Rafael Escribano, Raquel Navarro, Out-of-plane vibrational assignments and potential function of pyrrole and its deuterated derivatives Journal of the Chemical Society, Faraday Transactions. ,vol. 81, pp. 653- 662 ,(1985) , 10.1039/F29858100653