Fitting the truncated negative binomial distribution to count data

作者: Claude Manté , Saikou Oumar Kidé , Anne-Francoise Yao-Lafourcade , Bastien Mérigot

DOI: 10.1007/S10651-016-0343-1

关键词:

摘要: A frequent issue in the study of species abundance consists modeling empirical distributions repeated counts by parametric probability distributions. In this setting, it is desirable that chosen family exible enough to take into account very diverse patterns, and its parameters possess clear biological/ecological meanings. This case Negative Binomial distribution, work for marine shes invertebrates. distribution depends on a vector (K, P) parameters, ranges from Poisson (when K → +∞) Fisher's log-series, when 0. Besides, these have biologi-cal/ecological interpretations detailed literature reminded hereafter. We focus comparison three estimators K, P parameter α revisiting nice paper Rao (1971) about three-parameter unstandardized variant distribution. investigate coherency values resulting different estimators, with both real count data collected Mauritanian Exclusive Economic Zone during period 1987-2010 realistics simulations theses data. rst case, we built homogeneous lists (replicates), gathering observations each respect typical environments obtained clustering sampled stations. The best estimation was generally Penalized Minimum Hellinger Distance Estimation. Interestingly, most correctly seem compatible classical birth-and-dead model population growth immigration Kendall (1948).

参考文章(44)
Mevin B. Hooten, Christopher K. Wikle, A hierarchical Bayesian non-linear spatio-temporal model for the spread of invasive species with application to the Eurasian Collared-Dove Environmental and Ecological Statistics. ,vol. 15, pp. 59- 70 ,(2008) , 10.1007/S10651-007-0040-1
Andrew F Johnson, Stuart R Jenkins, Jan G Hiddink, Hilmar Hinz, None, Linking temperate demersal fish species to habitat: scales, patterns and future directions Fish and Fisheries. ,vol. 14, pp. 256- 280 ,(2013) , 10.1111/J.1467-2979.2012.00466.X
R. A. Fisher, A. Steven Corbet, C. B. Williams, The Relation Between the Number of Species and the Number of Individuals in a Random Sample of an Animal Population Journal of Animal Ecology. ,vol. 12, pp. 42- ,(1943) , 10.2307/1411
Th. Gasser, P. Hall, B. Presnell, Nonparametric estimation of the mode of a distribution of random curves Journal of the Royal Statistical Society: Series B (Statistical Methodology). ,vol. 60, pp. 681- 691 ,(1998) , 10.1111/1467-9868.00148
Sophie Dabo-Niang, Leila Hamdad, Camille Ternynck, Anne-Françoise Yao, A kernel spatial density estimation allowing for the analysis of spatial clustering. Application to Monsoon Asia Drought Atlas data Stochastic Environmental Research and Risk Assessment. ,vol. 28, pp. 2075- 2099 ,(2014) , 10.1007/S00477-014-0903-6
L. R. Taylor, R. A. Kempton, I. P. Woiwod, Diversity Statistics and the Log-Series Model Journal of Animal Ecology. ,vol. 45, pp. 255- ,(1976) , 10.2307/3778
Jack Lennon, W. E. Kunin, Kevin J. Gaston, The biology of rarity : causes and consequences of rare-common differences Journal of Animal Ecology. ,vol. 66, pp. 916- ,(1997) , 10.2307/6011
C. B. Williams, The logarithmic series and its application to biological problems Journal of Ecology. ,vol. 34, pp. 253- ,(1947) , 10.2307/2256719