Two Additional Carbohydrate-Binding Sites of β-Amylase from Bacillus cereus var. mycoides Are Involved in Hydrolysis and Raw Starch-Binding

作者: Z. Ye

DOI: 10.1093/JB/MVH043

关键词:

摘要: In the previous X-ray crystallographic study, it was found that beta-amylase from Bacillus cereus var. mycoides has three carbohydrate-binding sites aside active site: two (Site2 and Site3) in domain B one (Site1) C. To investigate roles of these catalytic reaction raw starch-binding, Site1 Site2 were mutated. From analyses starch-binding wild-type mutant enzymes, contributes to binding affinity raw-starch more than Site2, capacity is maintained when either or exists. The starch-digesting ability this enzyme poor. inhibition studies by maltitol, GGX alpha-CD for hydrolyses maltopentaose (G5) amylose ( (n) = 16) catalyzed a competitive inhibitor, while, maltitol behaves as mixed-type inhibitor depending on chain length substrate enzyme. analysis mechanism, we conclude bindings form an abortive ESI complex used substrate.

参考文章(27)
G Sarkar, S S Sommer, The "megaprimer" method of site-directed mutagenesis. BioTechniques. ,vol. 8, pp. 404- 407 ,(1990)
Marie-Francoise Gal-Coeffet, Amanda J. Jacks, Kay Sorimachi, Michael P. Williamson, Gary Williamson, David B. Archer, Expression in Aspergillus niger of the starch-binding domain of glucoamylase. Comparison with the proteolytically produced starch-binding domain. FEBS Journal. ,vol. 233, pp. 561- 567 ,(1995) , 10.1111/J.1432-1033.1995.561_2.X
Haruyuki IEFUJI, Mariko CHINO, Miyoshi KATO, Yuzuru IIMURA, Raw-starch-digesting and thermostable alpha-amylase from the yeast Cryptococcus sp. S-2: purification, characterization, cloning and sequencing. Biochemical Journal. ,vol. 318, pp. 989- 996 ,(1996) , 10.1042/BJ3180989
Hideo Miyake, Genji Kurisu, Masami Kusunoki, Sigenori Nishimura, Shinichi Kitamura, Yasunori Nitta, Crystal Structure of a Catalytic Site Mutant of beta-Amylase from Bacillus cereus var. mycoides Cocrystallized with Maltopentaose Biochemistry. ,vol. 42, pp. 5574- 5581 ,(2003) , 10.1021/BI020712X
Sôzaburo Ono, Keitaro Hiromi, Yoshiko Yoshikawa, Kinetics of Hydrolytic Reaction Catalyzed by Crystalline Bacterial α-Amylase. I. The Influence of pH Bulletin of the Chemical Society of Japan. ,vol. 36, pp. 957- 962 ,(1963) , 10.1246/BCSJ.31.957
Keitaro Hiromi, Yasunori Nitta, Chikashi Numata, Sôzaburo Ono, Subsite affinities of glucoamylase: Examination of the validity of the subsite theory Biochimica et Biophysica Acta (BBA) - Enzymology. ,vol. 302, pp. 362- 375 ,(1973) , 10.1016/0005-2744(73)90164-2
Tibor Nagy, Peter Simpson, Michael P. Williamson, Geoffrey P. Hazlewood, Harry J. Gilbert, Laszlo Orosz, All three surface tryptophans in Type IIa cellulose binding domains play a pivotal role in binding both soluble and insoluble ligands FEBS Letters. ,vol. 429, pp. 312- 316 ,(1998) , 10.1016/S0014-5793(98)00625-5
Stacey M. Southall, Peter J. Simpson, Harry J. Gilbert, Gary Williamson, Michael P. Williamson, The starch-binding domain from glucoamylase disrupts the structure of starch FEBS Letters. ,vol. 447, pp. 58- 60 ,(1999) , 10.1016/S0014-5793(99)00263-X
Ian P. Street, Charles R. Armstrong, Stephen G. Withers, Hydrogen bonding and specificity. Fluorodeoxy sugars as probes of hydrogen bonding in the glycogen phosphorylase-glucose complex. Biochemistry. ,vol. 25, pp. 6021- 6027 ,(1986) , 10.1021/BI00368A028