Enrichment and Isolation

作者: Andreas Teske , Heribert Cypionka , John G. Holt , Noel R. Krieg

DOI: 10.1128/9781555817497.CH11

关键词:

摘要: A section of this chapter focuses on the use enrichment and cultivation procedures with molecular methods, such as wholecell fluorescent in situ hybridization (FISH) or denaturing gradient gel electrophoresis (DGGE), to monitor progress an enrichment, evaluate presence contaminants, identify new isolates. Biophysical enrichments make conditions growth temperature, heat treatment, sonic oscillation, UV irradiation kill inhibit rest population. Biological may specific hosts for selective a particular organism, they take advantage some pathogenic property, invasiveness, which population does not possess. Bacteria are usually isolated from cultures by spatially separating organisms solid medium subsequently allowing them grow into colonies. The is designed demonstrate multiplicity many instances considerable ingenuity isolation methods bacteria presenting selected examples. buoyant density pure culture samples natural aquatic environments has been studied centrifugation Percoll gradients, average representative bacterium 1.080 pg µm -3. Isolation Legionella species, particularly those environment, can sometimes be facilitated acidification pH 2.2, kills contaminants more quickly than it species.

参考文章(163)
Daniel R. Shelton, James M. Tiedje, Isolation and partial characterization of bacteria in an anaerobic consortium that mineralizes 3-chlorobenzoic Acid. Applied and Environmental Microbiology. ,vol. 48, pp. 840- 848 ,(1984) , 10.1128/AEM.48.4.840-848.1984
Natuscka Lee, Per Halkjær Nielsen, Kjær Holm Andreasen, Stefan Juretschko, Jeppe Lund Nielsen, Karl-Heinz Schleifer, Michael Wagner, Combination of fluorescent in situ hybridization and microautoradiography-a new tool for structure-function analyses in microbial ecology Applied and Environmental Microbiology. ,vol. 65, pp. 1289- 1297 ,(1999) , 10.1128/AEM.65.3.1289-1297.1999
Bo Thamdrup, Kai Finster, Jens Würgler Hansen, Friedhelm Bak, Bacterial disproportionation of elemental sulfur coupled to chemical reduction of iron or manganese. Applied and Environmental Microbiology. ,vol. 59, pp. 101- 108 ,(1993) , 10.1128/AEM.59.1.101-108.1993
Sonia Kucera, R. S. Wolfe, A SELECTIVE ENRICHMENT METHOD FOR GALLIONELLA FERRUGINEA1 Journal of Bacteriology. ,vol. 74, pp. 344- 349 ,(1957) , 10.1128/JB.74.3.344-349.1957
K. J. Edwards, D. R. Rogers, C. O. Wirsen, T. M. McCollom, Isolation and Characterization of Novel Psychrophilic, Neutrophilic, Fe-Oxidizing, Chemolithoautotrophic α- and γ-Proteobacteria from the Deep Sea Applied and Environmental Microbiology. ,vol. 69, pp. 2906- 2913 ,(2003) , 10.1128/AEM.69.5.2906-2913.2003
W. B. Whitman, D. C. Coleman, W. J. Wiebe, Prokaryotes: The unseen majority Proceedings of the National Academy of Sciences of the United States of America. ,vol. 95, pp. 6578- 6583 ,(1998) , 10.1073/PNAS.95.12.6578
Alke Bruns, Heribert Cypionka, Jörg Overmann, Cyclic AMP and acyl homoserine lactones increase the cultivation efficiency of heterotrophic bacteria from the central Baltic Sea. Applied and Environmental Microbiology. ,vol. 68, pp. 3978- 3987 ,(2002) , 10.1128/AEM.68.8.3978-3987.2002
W E Balch, G E Fox, L J Magrum, C R Woese, R S Wolfe, Methanogens: reevaluation of a unique biological group. Microbiological Research. ,vol. 43, pp. 260- 296 ,(1979) , 10.1128/MR.43.2.260-296.1979