Integrating morphology and DNA barcoding to assess cetacean diversity in Brazil

作者: Vanessa S Silva , Natália Skueresky , Fernando Lopes , Tabata K Koch , Paulo Henrique Ott

DOI: 10.1007/S13364-021-00555-W

关键词:

摘要: Stranded cetaceans (whales, dolphins, and porpoises) are frequently used to obtain data on species occurrence demographic trends. Accurate species-level identification of these individuals is crucial, but often challenging or impossible when relying solely morphological features (e.g., for highly decayed specimens). To aid in the development a reliable molecular assay cetacean DNA-based identification, we tested efficacy standardized DNA barcode segment coxI gene identifying occurring off Brazilian coast its continental waters. We generated sequences from 150 specimens (collected by 16 institutions), most which included voucher material (skulls, skeletons and/or images) deposited scientific collections. This allowed direct comparison between their identification. CoxI correctly identified ~93% samples, comprising 33 (70% 47 reported waters). Two (Berardius arnuxii Phocoena dioptrica) were sequenced first time. For only two dolphins (Stenella coeruleoalba S. clymene) right whale (Eubalaena australis), failed identify due overlapping distributions intra- vs. interspecific divergences. Only one occurs southern hemisphere, facilitating this case. Stenella present extensive sympatry potential inter-species hybridization, suggesting that nuclear markers may be required These results indicate barcoding can reliably stranded highlight importance materials validate construction system.

参考文章(57)
Valerie J. Lounsbury, Joseph R. Geraci, Nathan Yates, Marine Mammals Ashore: A Field Guide for Strandings. Second Edition Unknown. ,(2005)
S. Leatherwood, Webber, T.A. Jefferson, Marine Mammals of the World : FAO species identification guide FAO. ,(1994)
Andrea Galimberti, Maurizio Casiraghi, Adriana Bellati, Antonia Bruno, Anna Sandionigi, DNA barcoding in mammals: what's new and where next? Hystrix-italian Journal of Mammalogy. ,vol. 26, pp. 13- 24 ,(2015) , 10.4404/HYSTRIX-26.1-11347
Toshio Kasuya, Giant Beaked Whales: Berardius bairdii and B. arnuxii Encyclopedia of Marine Mammals (Second Edition). pp. 498- 500 ,(2009) , 10.1016/B978-0-12-373553-9.00117-6
Salvatore Siciliano, Marcos César de Oliveira Santos, On the occurrence of the Arnoux's beaked whale (Berardius arnuxii) in Brazil Journal of the Marine Biological Association of the United Kingdom. ,vol. 83, pp. 887- 888 ,(2003) , 10.1017/S0025315403007999H
Diego Darriba, Guillermo L Taboada, Ramón Doallo, David Posada, jModelTest 2: more models, new heuristics and parallel computing Nature Methods. ,vol. 9, pp. 772- 772 ,(2012) , 10.1038/NMETH.2109
Leila Soledade Lemos, Jailson Fulgencio de Moura, Rachel Ann Hauser-Davis, Reinaldo Calixto de Campos, Salvatore Siciliano, Small cetaceans found stranded or accidentally captured in southeastern Brazil: bioindicators of essential and non-essential trace elements in the environment. Ecotoxicology and Environmental Safety. ,vol. 97, pp. 166- 175 ,(2013) , 10.1016/J.ECOENV.2013.07.025
Aziz Nacib Ab'Sáber, Litoral do Brasil Revista Do Instituto De Medicina Tropical De Sao Paulo. ,vol. 45, pp. 28- 28 ,(2003) , 10.1590/S0036-46652003000100016
Salvatore Siciliano, Jailson F. de Moura, Henrique R. Filgueiras, Paulo P. Rodrigues, Nilamon de Oliveira Leite Jr., Sightings of humpback whales on the Vitória-Trindade chain and around Trindade Island, Brazil Brazilian Journal of Oceanography. ,vol. 60, pp. 455- 459 ,(2012) , 10.1590/S1679-87592012000300016