Critical limitations of consensus clustering in class discovery
作者： Yasin Șenbabaoğlu , George Michailidis , Jun Z. Li
DOI: 10.1038/SREP06207
关键词:
摘要: … Figure 4 showed results for four specific combinations of K … the routine use of gene-gene correlation in simulations. Some … consensus matrix heatmap to declare the existence of clusters…
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W. N. Venables, B. D. Ripley, Modern Applied Statistics with S Springer. ,(2010) , 10.1007/978-0-387-21706-2
Stefano Monti, Pablo Tamayo, Jill Mesirov, Todd Golub, Consensus Clustering: A Resampling-Based Method for Class Discovery and Visualization of Gene Expression Microarray Data Machine Learning. ,vol. 52, pp. 91- 118 ,(2003) , 10.1023/A:1023949509487
Mark Smolkin, Debashis Ghosh, Cluster stability scores for microarray data in cancer studies. BMC Bioinformatics. ,vol. 4, pp. 36- 36 ,(2003) , 10.1186/1471-2105-4-36
Stephen Swift, Allan Tucker, Veronica Vinciotti, Nigel Martin, Christine Orengo, Xiaohui Liu, Paul Kellam, Consensus clustering and functional interpretation of gene-expression data. Genome Biology. ,vol. 5, pp. 1- 16 ,(2004) , 10.1186/GB-2004-5-11-R94
Sandrine Dudoit, Jane Fridlyand, A prediction-based resampling method for estimating the number of clusters in a dataset Genome Biology. ,vol. 3, pp. 1- 21 ,(2002) , 10.1186/GB-2002-3-7-RESEARCH0036
Natthakan Iam-on, Simon Garrett, LinkCluE: A MATLAB Package for Link-Based Cluster Ensembles Journal of Statistical Software. ,vol. 36, pp. 1- 36 ,(2010) , 10.18637/JSS.V036.I09
Melissa S. Cline, Brian Craft, Teresa Swatloski, Mary Goldman, Singer Ma, David Haussler, Jingchun Zhu, Exploring TCGA Pan-Cancer Data at the UCSC Cancer Genomics Browser Scientific Reports. ,vol. 3, pp. 2652- 2652 ,(2013) , 10.1038/SREP02652
Shai Ben-David, Ulrike von Luxburg, Dávid Pál, A Sober Look at Clustering Stability Learning Theory. pp. 5- 19 ,(2006) , 10.1007/11776420_4
Alberto Bertoni, Giorgio Valentini, Model order selection for bio-molecular data clustering. BMC Bioinformatics. ,vol. 8, pp. 1- 13 ,(2007) , 10.1186/1471-2105-8-S2-S7
Peter J. Rousseeuw, Silhouettes: a graphical aid to the interpretation and validation of cluster analysis Journal of Computational and Applied Mathematics. ,vol. 20, pp. 53- 65 ,(1987) , 10.1016/0377-0427(87)90125-7