Perfection of eccentricity: Mitochondrial genomes of diplonemids
作者： Gertraud Burger , Matus Valach
DOI: 10.1002/IUB.1927
关键词:
摘要: Mitochondria are the sandbox of evolution as exemplified most particularly by diplonemids, a group marine microeukaryotes. These protists uniquely characterized their highly multipartite mitochondrial genome and systematically fragmented genes whose pieces spread out over several dozens chromosomes. The type species Diplonema papillatum was first member this in which expression investigated experimentally. We now know that gene involves separate transcription (modules), RNA editing module transcripts, joining to mature mRNAs rRNAs. mechanism cognate recognition ligation is distinct from known intron splicing remains be uncovered. Here, we review current status research on architecture, well complement, structure, modes diplonemids. Further, discuss potential molecular mechanisms posttranscriptional processing, finally reflect evolutionary trajectories trends mtDNA seen protist group. © 2018 IUBMB Life, 70(12):1197-1206, 2018.
sci-hub.se 参考文章(64)
O.H. Thiemann, D.A. Maslov, L. Simpson, Disruption of RNA editing in Leishmania tarentolae by the loss of minicircle-encoded guide RNA genes. The EMBO Journal. ,vol. 13, pp. 5689- 5700 ,(1994) , 10.1002/J.1460-2075.1994.TB06907.X
Don Williamson, The curious history of yeast mitochondrial DNA. Nature Reviews Genetics. ,vol. 3, pp. 475- 481 ,(2002) , 10.1038/NRG814
Arthur Douglas McLaren, D. Shugar, Photochemistry of proteins and nucleic acids Photochemistry of proteins and nucleic acids.. ,(1964)
Zhiqiang Wu, Jocelyn M. Cuthbert, Douglas R. Taylor, Daniel B. Sloan, The massive mitochondrial genome of the angiosperm Silene noctiflora is evolving by gain or loss of entire chromosomes Proceedings of the National Academy of Sciences of the United States of America. ,vol. 112, pp. 10185- 10191 ,(2015) , 10.1073/PNAS.1421397112
R Saldanha, G Mohr, M Belfort, A M Lambowitz, Group I and group II introns. The FASEB Journal. ,vol. 7, pp. 15- 24 ,(1993) , 10.1096/FASEBJ.7.1.8422962
Colomban De Vargas, Stéphane Audic, Nicolas Henry, Johan Decelle, Frédéric Mahé, Ramiro Logares, Enrique Lara, Cédric Berney, Noan Le Bescot, Ian Probert, Margaux Carmichael, Julie Poulain, Sarah Romac, Sébastien Colin, Jean-Marc Aury, Lucie Bittner, Samuel Chaffron, Micah Dunthorn, Stefan Engelen, Olga Flegontova, Lionel Guidi, Aleš Horák, Olivier Jaillon, Gipsi Lima-Mendez, Julius Lukeš, Shruti Malviya, Raphael Morard, Matthieu Mulot, Eleonora Scalco, Raffaele Siano, Flora Vincent, Adriana Zingone, Céline Dimier, Marc Picheral, Sarah Searson, Stefanie Kandels-Lewis, Tara Oceans Coordinators, Silvia G Acinas, Peer Bork, Chris Bowler, Gabriel Gorsky, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Fabrice Not, Hiroyuki Ogata, Stephane Pesant, Jeroen Raes, Michael E Sieracki, Sabrina Speich, Lars Stemmann, Shinichi Sunagawa, Jean Weissenbach, Patrick Wincker, Eric Karsenti, Emmanuel Boss, Michael Follows, Lee Karp-Boss, Uros Krzic, Emmanuel G Reynaud, Christian Sardet, Matthew B Sullivan, Didier Velayoudon, Eukaryotic plankton diversity in the sunlit ocean Science. ,vol. 348, pp. 1261605- 1261605 ,(2015) , 10.1126/SCIENCE.1261605
Georgette N. Kiethega, Yifei Yan, Marcel Turcotte, Gertraud Burger, RNA-level unscrambling of fragmented genes in Diplonema mitochondria. RNA Biology. ,vol. 10, pp. 301- 313 ,(2013) , 10.4161/RNA.23340
Yusuke Yagi, Makoto Tachikawa, Hisayo Noguchi, Soichirou Satoh, Junichi Obokata, Takahiro Nakamura, None, Pentatricopeptide repeat proteins involved in plant organellar RNA editing RNA Biology. ,vol. 10, pp. 1419- 1425 ,(2013) , 10.4161/RNA.24908
Volker Knoop, Mareike Rüdinger, DYW-type PPR proteins in a heterolobosean protist: Plant RNA editing factors involved in an ancient horizontal gene transfer? FEBS Letters. ,vol. 584, pp. 4287- 4291 ,(2010) , 10.1016/J.FEBSLET.2010.09.041
L. M. Visomirski-Robic, J. M. Gott, Insertional editing of nascent mitochondrial RNAs in Physarum Proceedings of the National Academy of Sciences of the United States of America. ,vol. 94, pp. 4324- 4329 ,(1997) , 10.1073/PNAS.94.9.4324