Bivariate GWAS scan identifies six novel loci associated with lipid levels and coronary artery disease

作者: Katherine M. Siewert , Benjamin F. Voight

DOI: 10.1101/319848

关键词:

摘要: Background- Plasma lipid levels are heritable and genetically associated with risk of coronary artery disease (CAD). However, genome-wide association studies (GWAS) routinely analyze these traits independently one another. Joint GWAS for two related phenotypes can lead to a higher-powered analysis detect variants contributing both traits. Methods Results- We performed bivariate discover novel loci heart disease, using CAD Meta-Analysis (122,733 cases 424,528 controls), traits, data from the Global Lipid Genetics Consortium (188,577 subjects). identified six previously unreported at significance (P

参考文章(56)
Maiwand Ahmadsei, Dirk Lievens, Christian Weber, Philipp von Hundelshausen, Norbert Gerdes, Immune-mediated and lipid-mediated platelet function in atherosclerosis Current Opinion in Lipidology. ,vol. 26, pp. 438- 448 ,(2015) , 10.1097/MOL.0000000000000212
Johannes Raffler, Nele Friedrich, Matthias Arnold, Tim Kacprowski, Rico Rueedi, Elisabeth Altmaier, Sven Bergmann, Kathrin Budde, Christian Gieger, Georg Homuth, Maik Pietzner, Werner Römisch-Margl, Konstantin Strauch, Henry Völzke, Melanie Waldenberger, Henri Wallaschofski, Matthias Nauck, Uwe Völker, Gabi Kastenmüller, Karsten Suhre, Genome-Wide Association Study with Targeted and Non-targeted NMR Metabolomics Identifies 15 Novel Loci of Urinary Human Metabolic Individuality PLOS Genetics. ,vol. 11, pp. e1005487- ,(2015) , 10.1371/JOURNAL.PGEN.1005487
Omar S Ahmad, John A Morris, Muhammad Mujammami, Vincenzo Forgetta, Aaron Leong, Rui Li, Maxime Turgeon, Celia MT Greenwood, George Thanassoulis, James B Meigs, Robert Sladek, J Brent Richards, None, A Mendelian randomization study of the effect of type-2 diabetes on coronary heart disease. Nature Communications. ,vol. 6, pp. 7060- 7060 ,(2015) , 10.1038/NCOMMS8060
Philippe Froguel, Habib Zouali, Nathalie Vionnet, Gilberto Velho, Martine Vaxillaire, Fang Sun, Suzanne Lesage, Markus Stoffel, Jun Takeda, Philippe Passa, M. Alan Permutt, Jacques S. Beckmann, Graeme I. Bell, Daniel Cohen, Familial Hyperglycemia Due to Mutations in Glucokinase -- Definition of a Subtype of Diabetes Mellitus The New England Journal of Medicine. ,vol. 328, pp. 697- 702 ,(1993) , 10.1056/NEJM199303113281005
Edward A. Ruiz-Narváez, Yadong Yang, Yukiko Nakanishi, Jill Kirchdorfer, Hannia Campos, APOC3/A5 haplotypes, lipid levels, and risk of myocardial infarction in the Central Valley of Costa Rica Journal of Lipid Research. ,vol. 46, pp. 2605- 2613 ,(2005) , 10.1194/JLR.M500040-JLR200
K. Wang, M. Li, H. Hakonarson, ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data Nucleic Acids Research. ,vol. 38, ,(2010) , 10.1093/NAR/GKQ603
Karsten Suhre, Henri Wallaschofski, Johannes Raffler, Nele Friedrich, Robin Haring, Kathrin Michael, Christina Wasner, Alexander Krebs, Florian Kronenberg, David Chang, Christa Meisinger, H-Erich Wichmann, Wolfgang Hoffmann, Henry Völzke, Uwe Völker, Alexander Teumer, Reiner Biffar, Thomas Kocher, Stephan B Felix, Thomas Illig, Heyo K Kroemer, Christian Gieger, Werner Römisch-Margl, Matthias Nauck, A genome-wide association study of metabolic traits in human urine Nature Genetics. ,vol. 43, pp. 565- 569 ,(2011) , 10.1038/NG.837
Zhonghua Gao, Jin Zhang, Roberto Bonasio, Francesco Strino, Ayana Sawai, Fabio Parisi, Yuval Kluger, Danny Reinberg, PCGF homologs, CBX proteins, and RYBP define functionally distinct PRC1 family complexes. Molecular Cell. ,vol. 45, pp. 344- 356 ,(2012) , 10.1016/J.MOLCEL.2012.01.002
Jian Yang, S. Hong Lee, Michael E. Goddard, Peter M. Visscher, GCTA: a tool for genome-wide complex trait analysis. American Journal of Human Genetics. ,vol. 88, pp. 76- 82 ,(2011) , 10.1016/J.AJHG.2010.11.011