Phenotypic heterogeneity in fungi: importance and methodology

作者: Sarah K. Hewitt , David S. Foster , Paul S. Dyer , Simon V. Avery

DOI: 10.1016/J.FBR.2016.09.002

关键词:

摘要: Phenotypic heterogeneity describes the variation that exists between individual cells, spores or other biological entities within genetically-uniform populations of fungi organisms. Studies over last 10–-15 years have successfully used laboratory- and modelling-based approaches to demonstrate prevalence phenotypic characterise molecular bases phenomenon (primarily centred around heterogeneous gene expression). In contrast progress in these areas, relevance for competitive success organisms different natural scenarios, although widely speculated upon, has only recently begun be investigated. This focus review addresses this latter question as tackled recent studies with yeasts filamentous fungi. We concentrate on fungal activities such survival against environmental stressors, pathogenesis, spoilage. also discuss methodologies interrogating The emerging apparent importance provides a timely reminder certain, potentially core aspects biology still remain under-explored.

参考文章(88)
Robert-Jan Bleichrodt, Arman Vinck, Nick D. Read, Han A.B. Wösten, Selective transport between heterogeneous hyphal compartments via the plasma membrane lining septal walls of Aspergillus niger. Fungal Genetics and Biology. ,vol. 82, pp. 193- 200 ,(2015) , 10.1016/J.FGB.2015.06.010
David van Dijk, Riddhiman Dhar, Alsu M. Missarova, Lorena Espinar, William R. Blevins, Ben Lehner, Lucas B. Carey, Slow-growing cells within isogenic populations have increased RNA polymerase error rates and DNA damage. Nature Communications. ,vol. 6, pp. 7972- 7972 ,(2015) , 10.1038/NCOMMS8972
Stéphane Guyot, Patrick Gervais, Michael Young, Pascale Winckler, Jennifer Dumont, Hazel Marie Davey, Surviving the heat: heterogeneity of response in Saccharomyces cerevisiae provides insight into thermal damage to the membrane Environmental Microbiology. ,vol. 17, pp. 2982- 2992 ,(2015) , 10.1111/1462-2920.12866
Arman Vinck, Charissa de Bekker, Adam Ossin, Robin A. Ohm, Ronald P. de Vries, Han A. B. Wösten, Heterogenic expression of genes encoding secreted proteins at the periphery of Aspergillus niger colonies Environmental Microbiology. ,vol. 13, pp. 216- 225 ,(2011) , 10.1111/J.1462-2920.2010.02322.X
Sara L. Holland, Tom Reader, Paul S. Dyer, Simon V. Avery, Phenotypic heterogeneity is a selected trait in natural yeast populations subject to environmental stress. Environmental Microbiology. ,vol. 16, pp. 1729- 1740 ,(2014) , 10.1111/1462-2920.12243
Takeshi Noda, Chapter 2 Viability Assays to Monitor Yeast Autophagy Methods in Enzymology. ,vol. 451, pp. 27- 32 ,(2008) , 10.1016/S0076-6879(08)03202-3
Christian Dusny, Andreas Schmid, Microfluidic single-cell analysis links boundary environments and individual microbial phenotypes. Environmental Microbiology. ,vol. 17, pp. 1839- 1856 ,(2015) , 10.1111/1462-2920.12667
Anders S Hansen, Nan Hao, Erin K O'Shea, High-throughput microfluidics to control and measure signaling dynamics in single yeast cells Nature Protocols. ,vol. 10, pp. 1181- 1197 ,(2015) , 10.1038/NPROT.2015.079
Hazel M. Davey, Douglas B. Kell, Dieter H. Weichart, Arseny S. Kaprelyants, Estimation of microbial viability using flow cytometry. Current protocols in immunology. ,vol. 93, ,(1999) , 10.1002/0471142956.CY1103S29
C Wenisch, K F Linnau, B Parschalk, K Zedtwitz-Liebenstein, A Georgopoulos, Rapid susceptibility testing of fungi by flow cytometry using vital staining. Journal of Clinical Microbiology. ,vol. 35, pp. 5- 10 ,(1997) , 10.1128/JCM.35.1.5-10.1997