IBD5 is a general risk factor for inflammatory bowel disease: replication of association with Crohn disease and identification of a novel association with ulcerative colitis.

作者: Cosmas Giallourakis , Monika Stoll , Katie Miller , Jochen Hampe , Eric S. Lander

DOI: 10.1086/376417

关键词:

摘要: Inflammatory bowel disease (IBD) refers to complex chronic relapsing autoimmune disorders of the gastrointestinal tract that have been traditionally classified into Crohn (CD) and ulcerative colitis (UC). We previously reported genetic variation within a 250-kb haplotype (IBD5) in 5q31 cytokine gene cluster confers susceptibility CD Canadian population. In current study, we first replicated this association by examining 368 German trios with demonstrating, transmission/disequilibrium testing (TDT), same is associated (χ2=5.97; P=.007). Our original study focused on role IBD5 CD; next explored potential contribution locus UC 187 trios. Given TDT results present cohort UC, may also act as for (χ2=8.10; P=.002). then examined locus-locus interactions between CARD15, elsewhere confer risk exclusively CD. indicate two loci independently but these behave an epistatic fashion promote development UC. Moreover, was not particular clinical manifestations upon phenotypic stratification Taken together, our suggest general factor IBD, such CARD15 modifying characteristics disease.

参考文章(20)
Gary L. Gitnick, Gastrointestinal and liver disease ,(1979)
Mark J. Daly, John D. Rioux, Stephen F. Schaffner, Thomas J. Hudson, Eric S. Lander, High-resolution haplotype structure in the human genome. Nature Genetics. ,vol. 29, pp. 229- 232 ,(2001) , 10.1038/NG1001-229
Gillian C.L. Johnson, Laura Esposito, Bryan J. Barratt, Annabel N. Smith, Joanne Heward, Gianfranco Di Genova, Hironori Ueda, Heather J. Cordell, Iain A. Eaves, Frank Dudbridge, Rebecca C.J. Twells, Felicity Payne, Wil Hughes, Sarah Nutland, Helen Stevens, Phillipa Carr, Eva Tuomilehto-Wolf, Jaakko Tuomilehto, Stephen C.L. Gough, David G. Clayton, John A. Todd, Haplotype tagging for the identification of common disease genes Nature Genetics. ,vol. 29, pp. 233- 237 ,(2001) , 10.1038/NG1001-233
John D. Rioux, Mark J. Daly, Mark S. Silverberg, Kerstin Lindblad, Hillary Steinhart, Zane Cohen, Terrye Delmonte, Kerry Kocher, Katie Miller, Sheila Guschwan, Edward J. Kulbokas, Sinead O'Leary, Ellen Winchester, Ken Dewar, Todd Green, Valerie Stone, Christine Chow, Albert Cohen, Diane Langelier, Gilles Lapointe, Daniel Gaudet, Janet Faith, Nancy Branco, Shelley B. Bull, Robin S. McLeod, Anne M. Griffiths, Alain Bitton, Gordon R. Greenberg, Eric S. Lander, Katherine A. Siminovitch, Thomas J. Hudson, Genetic variation in the 5q31 cytokine gene cluster confers susceptibility to Crohn disease. Nature Genetics. ,vol. 29, pp. 223- 228 ,(2001) , 10.1038/NG1001-223
Jean-Pierre Hugot, Mathias Chamaillard, Habib Zouali, Suzanne Lesage, Jean-Pierre Cézard, Jacques Belaiche, Sven Almer, Curt Tysk, Colm A. O'Morain, Miquel Gassull, Vibeke Binder, Yigael Finkel, Antoine Cortot, Robert Modigliani, Pierre Laurent-Puig, Corine Gower-Rousseau, Jeanne Macry, Jean-Frédéric Colombel, Mourad Sahbatou, Gilles Thomas, Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn's disease Nature. ,vol. 411, pp. 599- 603 ,(2001) , 10.1038/35079107
Yasunori Ogura, Denise K. Bonen, Naohiro Inohara, Dan L. Nicolae, Felicia F. Chen, Richard Ramos, Heidi Britton, Thomas Moran, Reda Karaliuskas, Richard H. Duerr, Jean-Paul Achkar, Steven R. Brant, Theodore M. Bayless, Barbara S. Kirschner, Stephen B. Hanauer, Gabriel Nuñez, Judy H. Cho, A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease Nature. ,vol. 411, pp. 603- 606 ,(2001) , 10.1038/35079114
A. M. Glazier, Finding Genes That Underlie Complex Traits Science. ,vol. 298, pp. 2345- 2349 ,(2002) , 10.1126/SCIENCE.1076641
Andrew P. Cuthbert, Sheila A. Fisher, Muddassar M. Mirza, Kathy King, Jochen Hampe, Peter J.P. Croucher, Silvia Mascheretti, Jeremy Sanderson, Alastair Forbes, John Mansfield, Stefan Schreiber, Cathryn M. Lewis, Christopher G. Mathew, The contribution of NOD2 gene mutations to the risk and site of disease in inflammatory bowel disease Gastroenterology. ,vol. 122, pp. 867- 874 ,(2002) , 10.1053/GAST.2002.32415
Richard G. Farmer, Kirk A. Easley, George B. Rankin, Clinical patterns, natural history, and progression of ulcerative colitis. A long-term follow-up of 1116 patients Digestive Diseases and Sciences. ,vol. 38, pp. 1137- 1146 ,(1993) , 10.1007/BF01295733
N. Risch, K. Merikangas, The Future of Genetic Studies of Complex Human Diseases Science. ,vol. 273, pp. 1516- 1517 ,(1996) , 10.1126/SCIENCE.273.5281.1516