Molecular phylogenetics of the Handleyomys chapmani complex in Mesoamerica
作者： Ana Laura Almendra , Duke S. Rogers , Francisco X. González-Cózatl
关键词:
摘要: Handleyomys chapmani (Chapman’s Handley’s mouse) is a Mexican endemic rodent inhabiting humid montane forest of the Sierra Madre Oriental (SMO), Oaxacan Highlands (OH), and del Sur (SMS). The systematic status populations currently classified as H. has been problematic to date evolutionary relationships among remain unresolved. In this study we use sequences from mitochondrial cytochrome-b gene (1,143 base pairs [bp]) intron 7 beta fibrinogen (621 bp) reconstruct phylogeny, estimate divergence times, assess patterns sequence variation over geography samples chapmani. This species was recovered 2 monophyletic clades corresponding SMO-OH SMS mountain ranges. Moreover, saturatior, purported sister taxon chapmani, consistently lineage clade, rendering paraphyletic. geographic distribution saturatior strongly correlate with extent SMO-OH, SMS, Trans-Isthmian (highlands east Isthmus Tehuantepec through Central America) Divergence times associate their isolation late Pleistocene climatic
oup.com
oxfordjournals.org
sci-hub.se 参考文章(99)
James W. Fetzner, Extracting high-quality DNA from shed reptile skins: a simplified method. BioTechniques. ,vol. 26, pp. 1052- 1054 ,(1999) , 10.2144/99266BM09
V.M. Toledo, Pleistocene changes of vegetation in tropical Mexico Biological diversification in the tropics : proceedings, fifth international symposium of the Association for Tropical Biology, held at Macuto Beach, Caracas, Venezuela, February 8-13, 1979 / edited by G.T. Prance. ,(1982)
Guillermina Urbano Vidales, Oscar Sanchez, Michael D. Carleton, A new species of Habromys (Muroidea: Neotominae) from México, with generic review of species definitions and remarks on diversity patterns among Mesoamerican small mammals restricted to humid montane forests Proceedings of the Biological Society of Washington. ,vol. 115, pp. 488- 533 ,(2002)
Robert C Edgar, MUSCLE: a multiple sequence alignment method with reduced time and space complexity BMC Bioinformatics. ,vol. 5, pp. 113- 113 ,(2004) , 10.1186/1471-2105-5-113
Alejandro Velázquez, Stephane Couturier, Jean Francois Mas, La evaluación de los cambios de cobertura/uso del suelo en la República Mexicana Investigación ambiental Ciencia y política pública. ,vol. 1, pp. 23- 39 ,(2009)
George Gilbert. Goodwin, MacDougall, Thomas Baillie, ., Mammals from the State of Oaxaca, Mexico, in the American Museum of Natural History. Bulletin of the AMNH ; v. 141, article 1 New York : [American Museum of Natural History]. ,(1969)
Edward A. Goldman, The Rice Rats of North America (Genus Oryzomys) North American Fauna. ,(1918)
Robert W. Bryson, Robert W. Murphy, Amy Lathrop, David Lazcano-Villareal, Evolutionary drivers of phylogeographical diversity in the highlands of Mexico: a case study of the Crotalus triseriatus species group of montane rattlesnakes Journal of Biogeography. ,vol. 38, pp. 697- 710 ,(2011) , 10.1111/J.1365-2699.2010.02431.X
James S. Farris, Mari Källersjö, Arnold G. Kluge, Carol Bult, Constructing a Significance Test for Incongruence Systematic Biology. ,vol. 44, pp. 570- 572 ,(1995) , 10.1093/SYSBIO/44.4.570
Gerardo Ceballos, Joaquín Arroyo-Cabrales, Eduardo Ponce, Effects of Pleistocene environmental changes on the distribution and community structure of the mammalian fauna of Mexico Quaternary Research. ,vol. 73, pp. 464- 473 ,(2010) , 10.1016/J.YQRES.2010.02.006