Genetic structure of masu salmon (Oncorhynchus masou) populations in Hokkaido, northernmost Japan, inferred from mitochondrial DNA variation
作者： S. Kitanishi , K. Edo , T. Yamamoto , N. Azuma , O. Hasegawa
DOI: 10.1111/J.1095-8649.2007.01689.X
关键词:
摘要: Genetic structure of masu salmon Oncorhynchus masou populations in Hokkaido was examined by analysing mtDNA NADH dehydrogenase subunit 5 gene (561 bp) 382 individuals collected from 12 rivers, which there were no records artificial release. Analysis molecular variance showed that between groups level and within-group explained each c. 10% genetic variance. In neighbour-joining tree, four located southern clustered into a single group; however, other did not form any clear clusters. Fu’s FS, Tajima’s D mismatch distribution test indicated sudden expansion population the entire northernmost Chiraibetsu, genetically close to group. The Sea Japan including those Hokkaido, seem have served as refugia for during glacial periods, their dispersal straying interglacial periods affected Hokkaido.
sci-hub.se 参考文章(38)
Vl. A. Brykov, N. E. Polyakova, A. V. Prokhorova, Phylogeographic Analysis of Chum Salmon Oncorhynchus keta Walbaum in Asian Populations Based on mtDNA Variation Russian Journal of Genetics. ,vol. 39, pp. 75- 82 ,(2003) , 10.1023/A:1022074911828
Stefan Schneider, Laurent Georges Louis Excoffier, Estimation of Past Demographic Parameters From the Distribution of Pairwise Differences When the Mutation Rates Vary Among Sites: Application to Human Mitochondrial DNA Genetics. ,vol. 152, pp. 1079- 1089 ,(1999) , 10.1093/GENETICS/152.3.1079
Naoko Takezaki, Masatoshi Nei, Genetic Distances and Reconstruction of Phylogenetic Trees From Microsatellite DNA Genetics. ,vol. 144, pp. 389- 399 ,(1996) , 10.1093/GENETICS/144.1.389
Peter Smouse, J. M. Quattro, L. Excoffier, Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics. ,vol. 131, pp. 479- 491 ,(1992) , 10.1093/GENETICS/131.2.479
Matthew A. Cronin, William J. Spearman, Richard L. Wilmot, John C. Patton, John W. Bickham, Mitochondrial DNA Variation in Chinook (Oncorhynchus tshawytscha) and Chum Salmon (O. keta) Detected by Restriction Enzyme Analysis of Polymerase Chain Reaction (PCR) Products Canadian Journal of Fisheries and Aquatic Sciences. ,vol. 50, pp. 708- 715 ,(1993) , 10.1139/F93-081
V. Caputo, M. Giovannotti, P. Nisi Cerioni, M. L. Caniglia, A. Splendiani, Genetic diversity of brown trout in central Italy Journal of Fish Biology. ,vol. 65, pp. 403- 418 ,(2004) , 10.1111/J.0022-1112.2004.00458.X
Masatoshi Nei, Wen-Hsiung Li, Mathematical model for studying genetic variation in terms of restriction endonucleases Proceedings of the National Academy of Sciences of the United States of America. ,vol. 76, pp. 5269- 5273 ,(1979) , 10.1073/PNAS.76.10.5269
B. S. Weir, C. Clark Cockerham, ESTIMATING F
-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE Evolution. ,vol. 38, pp. 1358- 1370 ,(1984) , 10.1111/J.1558-5646.1984.TB05657.X
Ross F. Tallman, Michael C. Healey, Homing, Straying, and Gene Flow among Seasonally Separated Populations of Chum Salmon (Oncorhynchus keta) Canadian Journal of Fisheries and Aquatic Sciences. ,vol. 51, pp. 577- 588 ,(1994) , 10.1139/F94-060
S J McKay, R H Devlin, M J Smith, Phylogeny of Pacific salmon and trout based on growth hormone type-2 and mitochondrial NADH dehydrogenase subunit 3 DNA sequences Canadian Journal of Fisheries and Aquatic Sciences. ,vol. 53, pp. 1165- 1176 ,(1996) , 10.1139/F96-042