Label-free visual biosensor based on cascade amplification for the detection of Salmonella.

作者: Yuan Zhang , Jingjing Tian , Kai Li , Hongtao Tian , Wentao Xu

DOI: 10.1016/J.ACA.2019.05.020

关键词:

摘要: Abstract Salmonella is a widely distributed, extremely harmful bacteria, the presence of which requires confirmation via an on-site visual biosensor. In this study, we constructed label-free, cascade amplification visualization biosensor for sensitive and rapid detection enterica subsp. serovar typhimurium based on RDTG principle (recombinase polymerase (RPA), duplex-specific enzyme (DSN) cleavage, terminal deoxynucleotidyl transferase (TdT) extension G-quadruplexes output). Following DNA extraction spp., first step in construction involved recognition nucleic acids, carried out by RPA, to achieve signal within 10 min. This RPA product was then specifically cleaved DSN produce large number small double-stranded (dsDNA) products with 3′-OH 15 min second amplification. Thereafter, TdT employed empower these dsDNA extend long G-rich single-stranded DNAs (ssDNAs) 20 min, thus realizing third increase. These ssDNA displayed color change that could be directly observed through naked eye adding H2O2/3,3′,5,5′-tetramethylbenzidine (TMB). The spp. has several advantages, including low limit 6 cfu/mL. It isothermal-free instrument, simple operate, time less than 1.5 h. Furthermore, it can visually characterized quantified microplate reader detect food environmental samples, broad application prospects.

参考文章(45)
Noor Hidayah Mohd Sahroni, Ubong Anyi, Yoke Kqueen Cheah, Farinazleen Mohamad Ghazali, Chai Fung Pui, Son Radu, Jeyaletchumi Ponniah, Lay Ching Chai, Tunung Robin, Woan Chwen Wong, Salmonella: a foodborne pathogen Faculty of Food Science and Technology, Universiti Putra Malaysia. ,(2011)
Paul M. Lizardi, Xiaohua Huang, Zhengrong Zhu, Patricia Bray-Ward, David C. Thomas, David C. Ward, Mutation detection and single-molecule counting using isothermal rolling-circle amplification Nature Genetics. ,vol. 19, pp. 225- 232 ,(1998) , 10.1038/898
Nan Hao, Pan-Pan Dai, Tao Yu, Jing-Juan Xu, Hong-Yuan Chen, A dual target-recycling amplification strategy for sensitive detection of microRNAs based on duplex-specific nuclease and catalytic hairpin assembly Chemical Communications. ,vol. 51, pp. 13504- 13507 ,(2015) , 10.1039/C5CC05350A
Qian Wang, Ru-Dong Li, Bin-Cheng Yin, Bang-Ce Ye, Colorimetric detection of sequence-specific microRNA based on duplex-specific nuclease-assisted nanoparticle amplification Analyst. ,vol. 140, pp. 6306- 6312 ,(2015) , 10.1039/C5AN01350J
Harsh Sharma, Raj Mutharasan, Review of biosensors for foodborne pathogens and toxins Sensors and Actuators B-chemical. ,vol. 183, pp. 535- 549 ,(2013) , 10.1016/J.SNB.2013.03.137
Y. Zhao, H. Hoshiyama, J. W. Shay, W. E. Wright, Quantitative telomeric overhang determination using a double-strand specific nuclease Nucleic Acids Research. ,vol. 36, ,(2007) , 10.1093/NAR/GKM1063
Lutz Eric Lehmann, Klaus-Peter Hunfeld, Thomas Emrich, Gerd Haberhausen, Heimo Wissing, Andreas Hoeft, Frank Stüber, A multiplex real-time PCR assay for rapid detection and differentiation of 25 bacterial and fungal pathogens from whole blood samples. Medical Microbiology and Immunology. ,vol. 197, pp. 313- 324 ,(2008) , 10.1007/S00430-007-0063-0
Tianyan Song, Claudia Toma, Noboru Nakasone, Masaaki Iwanaga, Sensitive and rapid detection of Shigella and enteroinvasive Escherichia coli by a loop-mediated isothermal amplification method Fems Microbiology Letters. ,vol. 243, pp. 259- 263 ,(2005) , 10.1016/J.FEMSLE.2004.12.014
Daniel MacDougall, Warren B Crummett, None, Guidelines for data acquisition and data quality evaluation in environmental chemistry Analytical Chemistry. ,vol. 52, pp. 2242- 2249 ,(1980) , 10.1021/AC50064A004
Xiaopei Qiu, Hong Zhang, Helian Yu, Tianlun Jiang, Yang Luo, Duplex-specific nuclease-mediated bioanalysis Trends in Biotechnology. ,vol. 33, pp. 180- 188 ,(2015) , 10.1016/J.TIBTECH.2014.12.008