Enhanced phosphopeptide isolation by Fe(III)-IMAC using 1,1,1,3,3,3-hexafluoroisopropanol.

作者: Karin N. Barnouin , Sarah R. Hart , Andrew J. Thompson , Masahiro Okuyama , Michael Waterfield

DOI: 10.1002/PMIC.200401323

关键词:

摘要: IMAC can be used to selectively enrich phosphopeptides from complex peptide mixtures, but co-retention of acidic peptides together with the failure retain some restricts general utility method. In this study Fe(III)-IMAC was qualitatively and quantitatively assessed using a panel phosphopeptides, both synthetic derived proteolysis known phosphoproteins, identify causes success in application technique. Here we demonstrate that, as expected, more amino acid content are generally efficiently purified detected by MALDI-MS after than those basic content. Modulating loading buffer for significantly affects phosphopeptide binding suggests that conformational factors lead steric hindrance reduced accessibility phosphate important. The use 1,1,1,3,3,3-hexafluoroisopropanol is shown here improve enrichment subsequent detection MALDI-MS.

参考文章(56)
Radha G. Krishna, Finn Wold, Post-Translational Modifications of Proteins Methods in Protein Sequence Analysis. pp. 167- 172 ,(1993) , 10.1007/978-1-4899-1603-7_21
Grażyna Muszyńska, Grażyna Dobrowolska, Anders Medin, Anders Medin, Pia Ekman, Jerker O. Porath, Model studies on iron(III) ion affinity chromatography. II. Interaction of immobilized iron(III) ions with phosphorylated amino acids, peptides and proteins. Journal of Chromatography A. ,vol. 604, pp. 19- 28 ,(1992) , 10.1016/0021-9673(92)85524-W
B E Kemp, D J Graves, E Benjamini, E G Krebs, Role of multiple basic residues in determining the substrate specificity of cyclic AMP-dependent protein kinase. Journal of Biological Chemistry. ,vol. 252, pp. 4888- 4894 ,(1977) , 10.1016/S0021-9258(17)40137-2
D Godden-Kent, S J Talbot, C Boshoff, Y Chang, P Moore, R A Weiss, S Mittnacht, The cyclin encoded by Kaposi's sarcoma-associated herpesvirus stimulates cdk6 to phosphorylate the retinoblastoma protein and histone H1. Journal of Virology. ,vol. 71, pp. 4193- 4198 ,(1997) , 10.1128/JVI.71.6.4193-4198.1997
Wei Zhou, B. Alex Merrick, Morteza G. Khaledi, Kenneth B. Tomer, Detection and sequencing of phosphopeptides Journal of the American Society for Mass Spectrometry. ,vol. 11, pp. 273- 282 ,(2000) , 10.1016/S1044-0305(00)00100-8
Susanne Klumpp, Josef Krieglstein, Phosphorylation and dephosphorylation of histidine residues in proteins. FEBS Journal. ,vol. 269, pp. 1067- 1071 ,(2002) , 10.1046/J.1432-1033.2002.02755.X
Karl R. Clauser, Peter Baker, Alma L. Burlingame, Role of Accurate Mass Measurement (±10 ppm) in Protein Identification Strategies Employing MS or MS/MS and Database Searching Analytical Chemistry. ,vol. 71, pp. 2871- 2882 ,(1999) , 10.1021/AC9810516
Karin Barnouin, Marlène L. Dubuisson, Emma S. Child, Silvia Fernandez de Mattos, Janet Glassford, René H. Medema, David J. Mann, Eric W.-F. Lam, H2O2Induces a Transient Multi-phase Cell Cycle Arrest in Mouse Fibroblasts through Modulating Cyclin D and p21Cip1Expression Journal of Biological Chemistry. ,vol. 277, pp. 13761- 13770 ,(2002) , 10.1074/JBC.M111123200
Zhihong Chen, Vahan B. Indjeian, Michael McManus, Leyu Wang, Brian David Dynlacht, CP110, a cell cycle-dependent CDK substrate, regulates centrosome duplication in human cells. Developmental Cell. ,vol. 3, pp. 339- 350 ,(2002) , 10.1016/S1534-5807(02)00258-7
Marc Kipping, Toralf Zarnt, Steffen Kiessig, Ulf Reimer, Gunter Fischer, Peter Bayer, Increased backbone flexibility in threonine45-phosphorylated hirudin upon pH change. Biochemistry. ,vol. 40, pp. 7957- 7963 ,(2001) , 10.1021/BI010317R