Light-induced structural changes in a monomeric bacteriophytochrome.

作者: Heikki Takala , Stephan Niebling , Oskar Berntsson , Alexander Björling , Heli Lehtivuori

DOI: 10.1063/1.4961911

关键词:

摘要: Phytochromes sense red light in plants and various microorganism. Light absorption causes structural changes within the protein, which alter its biochemical activity. Bacterial phytochromes are dimeric proteins, but functional relevance of this arrangement remains unclear. Here, we use time-resolved X-ray scattering to reveal solution change a monomeric variant photosensory core module phytochrome from Deinococcus radiodurans. The data two motions, bend twist PHY domain with respect chromophore-binding domains. Infrared spectroscopy shows refolding tongue. We conclude that monomer is sufficient perform light-induced changes. This implies allosteric cooperation other not needed for activation. may instead be intrinsic output domains bacterial phytochromes.

参考文章(45)
Xiaojing Yang, Emina A. Stojković, Wesley B. Ozarowski, Jane Kuk, Erna Davydova, Keith Moffat, Light Signaling Mechanism of Two Tandem Bacteriophytochromes Structure. ,vol. 23, pp. 1179- 1189 ,(2015) , 10.1016/J.STR.2015.04.022
Manasi P. Bhate, Kathleen S. Molnar, Mark Goulian, William F. DeGrado, Signal transduction in histidine kinases: insights from new structures. Structure. ,vol. 23, pp. 981- 994 ,(2015) , 10.1016/J.STR.2015.04.002
Heikki Takala, Alexander Björling, Marko Linna, Sebastian Westenhoff, Janne A. Ihalainen, Light-induced Changes in the Dimerization Interface of Bacteriophytochromes. Journal of Biological Chemistry. ,vol. 290, pp. 16383- 16392 ,(2015) , 10.1074/JBC.M115.650127
Alexander Björling, Oskar Berntsson, Heikki Takala, Kevin D. Gallagher, Hardik Patel, Emil Gustavsson, Rachael St. Peter, Phu Duong, Angela Nugent, Fan Zhang, Peter Berntsen, Roberto Appio, Ivan Rajkovic, Heli Lehtivuori, Matthijs R. Panman, Maria Hoernke, Stephan Niebling, Rajiv Harimoorthy, Tilman Lamparter, Emina A. Stojković, Janne A. Ihalainen, Sebastian Westenhoff, Ubiquitous Structural Signaling in Bacterial Phytochromes. Journal of Physical Chemistry Letters. ,vol. 6, pp. 3379- 3383 ,(2015) , 10.1021/ACS.JPCLETT.5B01629
Berk Hess, Carsten Kutzner, David van der Spoel, Erik Lindahl, GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation Journal of Chemical Theory and Computation. ,vol. 4, pp. 435- 447 ,(2008) , 10.1021/CT700301Q
Michele E. Auldridge, Katrina T. Forest, Bacterial phytochromes: More than meets the light Critical Reviews in Biochemistry and Molecular Biology. ,vol. 46, pp. 67- 88 ,(2011) , 10.3109/10409238.2010.546389
ALAN M. JONES, HAROLD P. ERICKSON, Domain structure of phytochrome from Avena sativa visualized by electron microscopy. Photochemistry and Photobiology. ,vol. 49, pp. 479- 483 ,(1989) , 10.1111/J.1751-1097.1989.TB09198.X
Shuichi Nosé, M.L. Klein, Constant pressure molecular dynamics for molecular systems Molecular Physics. ,vol. 50, pp. 1055- 1076 ,(1983) , 10.1080/00268978300102851
E. Sethe Burgie, Tong Wang, Adam N. Bussell, Joseph M. Walker, Huilin Li, Richard D. Vierstra, Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion Journal of Biological Chemistry. ,vol. 289, pp. 24573- 24587 ,(2014) , 10.1074/JBC.M114.571661
Frank Andel, J. Clark Lagarias, Richard A. Mathies, Resonance raman analysis of chromophore structure in the lumi-R photoproduct of phytochrome Biochemistry. ,vol. 35, pp. 15997- 16008 ,(1996) , 10.1021/BI962175K