Global diversity and distribution of three necrotrophic effectors in Phaeosphaeria nodorum and related species.
作者： Megan C McDonald , Richard P Oliver , Timothy L Friesen , Patrick C Brunner , Bruce A McDonald
DOI: 10.1111/NPH.12257
关键词:
摘要: Population genetic and phylogenetic studies have shown that Phaeosphaeria nodorum is a member of species complex probably shares its center origin with wheat (Triticum aestivum Triticum durum). We examined the evolutionary histories three known necrotrophic effectors (NEs) produced by P. compared them neutral loci. screened over 1000 individuals for presence/absence each effector assigned individual to multi-effector genotype. Diversity at NE locus was assessed sequencing c. 200 locus. found significant differences in frequency among populations. propose these reflect corresponding susceptibility gene cultivars. The population harboring highest sequence diversity different never coincided populations Coalescent analyses showed discontinuous presence all NEs nine closely related species. Only two were harbor NEs. present evidence described transmitted sister species, avenaria tritici 1, via interspecific hybridization. © 2013 New Phytologist Trust.
curtin.edu.au参考文章(53)
D. Simberloff, Use of Rarefaction and Related Methods in Ecology ASTM special technical publications. pp. 150- 165 ,(1978) , 10.1520/STP35663S
Sir Ronald Aylmer Fisher, Statistical Methods for Research Workers ,(1925)
M. Balter, Seeking Agriculture's Ancient Roots Science. ,vol. 316, pp. 1830- 1835 ,(2007) , 10.1126/SCIENCE.316.5833.1830
N. Ryman, P. E. Jorde, Statistical power when testing for genetic differentiation. Molecular Ecology. ,vol. 10, pp. 2361- 2373 ,(2001) , 10.1046/J.0962-1083.2001.01345.X
Izumi Chuma, Chihiro Isobe, Yuma Hotta, Kana Ibaragi, Natsuru Futamata, Motoaki Kusaba, Kentaro Yoshida, Ryohei Terauchi, Yoshikatsu Fujita, Hitoshi Nakayashiki, Barbara Valent, Yukio Tosa, Multiple Translocation of the AVR-Pita Effector Gene among Chromosomes of the Rice Blast Fungus Magnaporthe oryzae and Related Species PLoS Pathogens. ,vol. 7, pp. e1002147- ,(2011) , 10.1371/JOURNAL.PPAT.1002147
Paul J. Maiste, Bruce S. Weir, Optimal testing strategies for large, sparse multinomial models Computational Statistics & Data Analysis. ,vol. 46, pp. 605- 620 ,(2004) , 10.1016/J.CSDA.2003.08.002
Zhaohui Liu, Zengcui Zhang, Justin D. Faris, Richard P. Oliver, Robert Syme, Megan C. McDonald, Bruce A. McDonald, Peter S. Solomon, Shunwen Lu, Weilin L. Shelver, Steven Xu, Timothy L. Friesen, The cysteine rich necrotrophic effector SnTox1 produced by Stagonospora nodorum triggers susceptibility of wheat lines harboring Snn1. PLOS Pathogens. ,vol. 8, ,(2012) , 10.1371/JOURNAL.PPAT.1002467
Angela P Van de Wouw, Anton J Cozijnsen, James K Hane, Patrick C Brunner, Bruce A McDonald, Richard P Oliver, Barbara J Howlett, None, Evolution of Linked Avirulence Effectors in Leptosphaeria maculans Is Affected by Genomic Environment and Exposure to Resistance Genes in Host Plants PLoS Pathogens. ,vol. 6, pp. e1001180- ,(2010) , 10.1371/JOURNAL.PPAT.1001180
Sophien Kamoun, Groovy times: filamentous pathogen effectors revealed. Current Opinion in Plant Biology. ,vol. 10, pp. 358- 365 ,(2007) , 10.1016/J.PBI.2007.04.017
B. A. McDonald, J. P. Martinez, Restriction fragment length polymorphisms in Septoria tritici occur at a high frequency Current Genetics. ,vol. 17, pp. 133- 138 ,(1990) , 10.1007/BF00312858