One-dimensional self-assembly of a rational designed β-structure peptide

作者: Chong Wang , Lixin Huang , Lijun Wang , Yuankai Hong , Yinlin Sha

DOI: 10.1002/BIP.20681

关键词:

摘要: Fabricating various nanostructures based on the self-assembly of diverse biological molecules is now great interest to field bionanotechnology. In this study, we report a de novo designed peptide (T1) with preferential β-hairpin forming property that can spontaneously assemble into nanofibrils in ultrapure water. The assembled by T1 could grow up tens microns length left-handed helical twist and an average height 4.9 ± 0.9 nm. Moreover, protofilaments nucleus structures both similar 1.4 0.2 nm were observed during fibrilization as well via sonication mature nanofibrils. A typical conformational transition from random coil β-structure was association fibrilization. Molecular modeling assemblies displayed organize parallel fashion which β-strands align antiparallel each adjoining β-strand runs at about 2.9° respect one located before it along fibrillar axis. It also revealed maximum thickness assembly intermediate, tape structure, four tapes further fibril diameter 4.1 Taken together results obtained AFM, CD, molecular modeling, probably undergoes hierarchy approach, aromatic stacking electrostatic interactions between are most likely two major factors directing one-dimensional self-assembly. Based these studies, propose be used model investigate β-sheet process potential bioorganic template develop functional materials. © 2007 Wiley Periodicals, Inc. Biopolymers 86: 23–31, 2007. This article originally published online accepted preprint. “Published Online” date corresponds preprint version. You request copy emailing editorial office biopolymers@wiley.com

参考文章(42)
Youcef Fezoui, David B. Teplow, Dean M. Hartley, Dominic M. Walsh, Dennis J. Selkoe, John J. Osterhout, A de novo designed helix-turn-helix peptide forms nontoxic amyloid fibrils Nature Structural & Molecular Biology. ,vol. 7, pp. 1095- 1099 ,(2000) , 10.1038/81937
D. E. Wagner, C. L. Phillips, W. M. Ali, G. E. Nybakken, E. D. Crawford, A. D. Schwab, W. F. Smith, R. Fairman, Toward the development of peptide nanofilaments and nanoropes as smart materials Proceedings of the National Academy of Sciences of the United States of America. ,vol. 102, pp. 12656- 12661 ,(2005) , 10.1073/PNAS.0505871102
María Teresa Pastor, Alexandra Esteras-Chopo, Manuela López de la Paz, Design of model systems for amyloid formation: lessons for prediction and inhibition. Current Opinion in Structural Biology. ,vol. 15, pp. 57- 63 ,(2005) , 10.1016/J.SBI.2005.01.004
Maxim G. Ryadnov, Derek N. Woolfson, Engineering the morphology of a self-assembling protein fibre Nature Materials. ,vol. 2, pp. 329- 332 ,(2003) , 10.1038/NMAT885
Joel P. Schneider, Darrin J. Pochan, Bulent Ozbas, Karthikan Rajagopal, Lisa Pakstis, Juliana Kretsinger, Responsive Hydrogels from the Intramolecular Folding and Self-Assembly of a Designed Peptide Journal of the American Chemical Society. ,vol. 124, pp. 15030- 15037 ,(2002) , 10.1021/JA027993G
Natalie C.J. Strynadka, Susan E. Jensen, Pedro M. Alzari, Michael N.G. James, A potent new mode of beta-lactamase inhibition revealed by the 1.7 A X-ray crystallographic structure of the TEM-1-BLIP complex. Nature Structural & Molecular Biology. ,vol. 3, pp. 290- 297 ,(1996) , 10.1038/NSB0396-290
Rituparna S. Roy, Hosahudya N. Gopi, S. Raghothama, Richard D. Gilardi, Isabella L Karle, Padmanabhan Balaram, Peptide Hairpins with Strand Segments Containing α- and β- Amino Acid Residues : Cross – Strand Aromatic Interactions of Facing Phe Residues. Biopolymers. ,vol. 80, pp. 787- 799 ,(2005) , 10.1002/BIP.20294
Brian Bothner, Yves Aubin, Richard W. Kriwacki, Peptides derived from two dynamically disordered proteins self-assemble into amyloid-like fibrils. Journal of the American Chemical Society. ,vol. 125, pp. 3200- 3201 ,(2003) , 10.1021/JA028265W
Amalia Aggeli, Mark Bell, Lisa M. Carrick, Colin W. G. Fishwick, Richard Harding, Peter J. Mawer, Sheena E. Radford, Andrew E. Strong, Neville Boden, pH as a Trigger of Peptide β-Sheet Self-Assembly and Reversible Switching between Nematic and Isotropic Phases Journal of the American Chemical Society. ,vol. 125, pp. 9619- 9628 ,(2003) , 10.1021/JA021047I
Radhakrishnan Mahalakshmi, Ganesh Shanmugam, Prasad L. Polavarapu, Padmanabhan Balaram, Circular dichroism of designed peptide helices and β-hairpins: analysis of trp- and tyr-rich peptides ChemBioChem. ,vol. 6, pp. 2152- 2158 ,(2005) , 10.1002/CBIC.200500152