Recombination and Molecular Epidemiology of HIV-1 and Enteroviruses

作者: Mika Salminen

DOI: 10.1007/978-1-4615-1157-1_6

关键词:

摘要: In addition to evolution by point mutations, many viruses have evolved mechanisms shuffle their genetic material between evolutionary lineages. Since only replicate as intracellular parasites, exchanges of materials require simultaneous infection a host and single cells with two or more lineages (i. e., strains). The exchange then takes place through the replication virus. case segmented genomes, for this are simple: simple mixing genome segments within cell results in random assortment packaging into progeny virions. It is believed that primary mechanism reassortment such Influenza A Rotavirus (Palese Young, 1982; Desselberger et al., 2001; Ramig Ward, 1991). For continuous segment physically link together genomes separate required produce recombinants. While ample evidence recombination exists viruses, understood few cases. Also, DNA- RNA-viruses probably recombine entirely different mechanisms.

参考文章(106)
BORIS RENJIFO, BETH CHAPLIN, DAVIS MWAKAGILE, PULIN SHAH, FREDRIK VANNBERG, GERNARD MSAMANGA, DAVID HUNTER, WAFAIE FAWZI, MAX ESSEX, Epidemic expansion of HIV type 1 subtype C and recombinant genotypes in Tanzania. AIDS Research and Human Retroviruses. ,vol. 14, pp. 635- 638 ,(1998) , 10.1089/AID.1998.14.635
Robert F. Ramig, Richard L. Ward, Genomic segment reassortment in rotaviruses and other reoviridae. Advances in Virus Research. ,vol. 39, pp. 163- 207 ,(1991) , 10.1016/S0065-3527(08)60795-2
M Vanden Haesevelde, J L Decourt, R J De Leys, B Vanderborght, G van der Groen, H van Heuverswijn, E Saman, Genomic cloning and complete sequence analysis of a highly divergent African human immunodeficiency virus isolate. Journal of Virology. ,vol. 68, pp. 1586- 1596 ,(1994) , 10.1128/JVI.68.3.1586-1596.1994
Feng Gao, David L. Robertson, Catherine D. Carruthers, Sandra G. Morrison, Bixi Jian, Yalu Chen, Françoise Barré-Sinoussi, Marc Girard, Alagarsamy Srinivasan, Alash’le G. Abimiku, George M. Shaw, Paul M. Sharp, Beatrice H. Hahn, A comprehensive panel of near-full-length clones and reference sequences for non-subtype B isolates of human immunodeficiency virus type 1. Journal of Virology. ,vol. 72, pp. 5680- 5698 ,(1998) , 10.1128/JVI.72.7.5680-5698.1998
Ulrich Desselberger, Miren Iturriza‐Gómara, Jim J Gray, None, Rotavirus epidemiology and surveillance. Novartis Foundation symposium. ,vol. 238, pp. 125- 152 ,(2001) , 10.1002/0470846534.CH9
L G Gürtler, P H Hauser, J Eberle, A von Brunn, S Knapp, L Zekeng, J M Tsague, L Kaptue, A new subtype of human immunodeficiency virus type 1 (MVP-5180) from Cameroon Journal of Virology. ,vol. 68, pp. 1581- 1585 ,(1994) , 10.1128/JVI.68.3.1581-1585.1994
Joel R. Neilson, Grace C. John, Jean K. Carr, Paul Lewis, Joan K. Kreiss, Stephanie Jackson, Ruth W. Nduati, Dorothy Mbori-Ngacha, Dana D. Panteleeff, Sharon Bodrug, Christina Giachetti, Martha A. Bott, Barbra A. Richardson, Job Bwayo, Jeckoniah Ndinya-Achola, Julie Overbaugh, Subtypes of Human Immunodeficiency Virus Type 1 and Disease Stage among Women in Nairobi, Kenya Journal of Virology. ,vol. 73, pp. 4393- 4403 ,(1999) , 10.1128/JVI.73.5.4393-4403.1999
Francine E. McCutchan, Mika O. Salminen, Donald S. Burke, Jean K. Carr, HIV-1 genetic diversity. AIDS. ,vol. 10, ,(1996)
Ursula Dietrich, Manuel Grez, Hagen von Briesen, Barbara Panhans, Manfred Geiendörfer, Herbert Kühnel, Janak Maniar, Gurudas Mahambre, Walter B. Becker, Michael L.B. Becker, Helga Riibsamen-Waigmann, HIV-1 strains from India are highly divergent from prototypic African and US/European strains, but are linked to a South African isolate. AIDS. ,vol. 7, pp. 23- 28 ,(1993) , 10.1097/00002030-199301000-00003
Jiuping Ji, Lawrence A. Loeb, Fidelity of HIV-1 reverse transcriptase copying RNA in vitro. Biochemistry. ,vol. 31, pp. 954- 958 ,(1992) , 10.1021/BI00119A002