Hole Conductivity in Heterogeneous DNA Fragments

作者: V.D. Lakhno , A.I. Zhukov , O.A. Ponomarev , A.S. Shigaev

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摘要: The characteristics of cation radical (hole) migration in heterogeneous DNA were investigated on the basis Kubo formula, which correlation functions obtained from solutions systems Bogoliubov hierarchy. cutting hierarchy was carried out by excepting correlations third and higher order. system non-linear differential equations both analytically numerically. environment polarization, caused interaction holes with base pairs vibrations, shown to play key role transport processes. energy can ten-fold exceed vibration energy. transfer rate between adjacent bases one-dimensional case be almost independent nature behavior more distant pairs. charge probability amplitude oscillates picosecond timescale. Nonetheless, rates hole transfer, averaging over these oscillations, turned very close experimental data. calculated dependence two guanine number intervening adenine also good agreement Besides, temperature investigated. Hopping mechanism make main contribution process at 300 K.

参考文章(53)
Cees Dekker, Mark Ratner, Electronic properties of DNA Physics World. ,vol. 14, pp. 29- 33 ,(2001) , 10.1088/2058-7058/14/8/33
P. J. de Pablo, F. Moreno-Herrero, J. Colchero, J. Gómez Herrero, P. Herrero, A. M. Baró, Pablo Ordejón, José M. Soler, Emilio Artacho, Absence of dc-conductivity in lambda-DNA. Physical Review Letters. ,vol. 85, pp. 4992- 4995 ,(2000) , 10.1103/PHYSREVLETT.85.4992
David Becker, Michael D. Sevilla, The chemical consequences of radiation damage to DNA Advances in radiation biology. ,vol. 17, pp. 121- 180 ,(1993) , 10.1016/B978-0-12-035417-7.50006-4
Frederick D. Lewis, Xiaoyang Liu, Jianqin Liu, Scott E. Miller, Ryan T. Hayes, Michael R. Wasielewski, Direct measurement of hole transport dynamics in DNA. Nature. ,vol. 406, pp. 51- 53 ,(2000) , 10.1038/35017524
Thierry Dauxois, Michel Peyrard, A. R. Bishop, Entropy-driven DNA denaturation. Physical Review E. ,vol. 47, ,(1993) , 10.1103/PHYSREVE.47.R44
Jason D. Slinker, Natalie B. Muren, Sara E. Renfrew, Jacqueline K. Barton, DNA charge transport over 34 nm Nature Chemistry. ,vol. 3, pp. 228- 233 ,(2011) , 10.1038/NCHEM.982
T Holstein, Studies of polaron motion Annals of Physics. ,vol. 8, pp. 325- 342 ,(1959) , 10.1016/0003-4916(59)90002-8
Georgios Triberis, Margarita Dimakogianni, DNA in the material world: electrical properties and nano-applications. Recent Patents on Nanotechnology. ,vol. 3, pp. 135- 153 ,(2009) , 10.2174/187221009788490040
Eric Meggers, Maria E. Michel-Beyerle, Bernd Giese, Sequence Dependent Long Range Hole Transport in DNA Journal of the American Chemical Society. ,vol. 120, pp. 12950- 12955 ,(1998) , 10.1021/JA983092P
Frederick D. Lewis, Xiaoyang Liu, Jianqin Liu, Ryan T. Hayes, Michael R. Wasielewski, Dynamics and equilibria for oxidation of G, GG, and GGG sequences in DNA hairpins [22] Journal of the American Chemical Society. ,vol. 122, pp. 12037- 12038 ,(2000) , 10.1021/JA002440W