A fourth order PDE based fuzzy c- means approach for segmentation of microscopic biopsy images in presence of Poisson noise for cancer detection.

作者: Rajesh Kumar , Subodh Srivastava , Rajeev Srivastava

DOI: 10.1016/J.CMPB.2017.05.003

关键词:

摘要: Abstract Background and objective For cancer detection from microscopic biopsy images, image segmentation step used for of cells nuclei play an important role. Accuracy approach dominate the final results. Also images have intrinsic Poisson noise if it is present in results may not be accurate. The to propose efficient fuzzy c-means based which can also handle during process itself i.e. removal combined one step. Methods To address above issues, this paper a fourth order partial differential equation (FPDE) nonlinear filter adapted with method proposed. This capable effectively handling problem blocky artifacts while achieving good tradeoff between removals edge preservation cells. Results proposed tested on breast data set region interest (ROI) segmented ground truth images. contains 31 benign 27 malignant size 896 × 768. selected all 58 are available set. Finally, result obtained compared popular algorithms; c-means, color k-means, texture segmentation, total variation approaches. Conclusions experimental shows that providing better terms various performance measures such as Jaccard coefficient, dice index, Tanimoto area under curve, accuracy, true positive rate, negative false random global consistency error, variance information other approaches detection.

参考文章(39)
Jan Lellmann, Jörg Kappes, Jing Yuan, Florian Becker, Christoph Schnörr, Convex Multi-class Image Labeling by Simplex-Constrained Total Variation international conference on scale space and variational methods in computer vision. pp. 150- 162 ,(2009) , 10.1007/978-3-642-02256-2_13
Rajesh Kumar, Rajeev Srivastava, Subodh Srivastava, Detection and Classification of Cancer from Microscopic Biopsy Images Using Clinically Significant and Biologically Interpretable Features Journal of Medical Engineering. ,vol. 2015, pp. 457906- 457906 ,(2015) , 10.1155/2015/457906
Lei He, L. Rodney Long, Sameer Antani, George R. Thoma, Histology image analysis for carcinoma detection and grading Computer Methods and Programs in Biomedicine. ,vol. 107, pp. 538- 556 ,(2012) , 10.1016/J.CMPB.2011.12.007
Ajay Basavanhally, Elaine Yu, Jun Xu, Shridar Ganesan, Michael Feldman, John Tomaszewski, Anant Madabhushi, Incorporating domain knowledge for tubule detection in breast histopathology using O'Callaghan neighborhoods Proceedings of SPIE. ,vol. 7963, pp. 796310- ,(2011) , 10.1117/12.878092
Subodh Srivastava, Neeraj Sharma, SK Singh, R Srivastava, A combined approach for the enhancement and segmentation of mammograms using modified fuzzy C-means method in wavelet domain. Journal of Medical Physics. ,vol. 39, pp. 169- ,(2014) , 10.4103/0971-6203.139007
Kelly H. Zou, Simon K. Warfield, Aditya Bharatha, Clare M.C. Tempany, Michael R. Kaus, Steven J. Haker, William M. Wells, Ferenc A. Jolesz, Ron Kikinis, Statistical validation of image segmentation quality based on a spatial overlap index1 Academic Radiology. ,vol. 11, pp. 178- 189 ,(2004) , 10.1016/S1076-6332(03)00671-8
Madhumala Ghosh, Devkumar Das, Chandan Chakraborty, Ajoy K. Ray, Automated leukocyte recognition using fuzzy divergence. Micron. ,vol. 41, pp. 840- 846 ,(2010) , 10.1016/J.MICRON.2010.04.017