Molecular orbital calculations on the conformation of amino acid residues of proteins.

作者: Bernard Pullman , Alberte Pullman

DOI: 10.1016/S0065-3233(08)60233-8

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摘要: Publisher Summary This chapter provides an overview of the quantum–mechanical work done in conformation amino acid residues proteins with double objective comparing results those previous empirical computations and constantly rapidly increasing amount experimental data. The most extensive applications have been field their constituents, which exhibit significant conformational problems biochemistry. properties polypeptides may be classified into three categories corresponding broadly to successive stages development refinement, include—(1) hard sphere approximation, (2) partitioned potential energy (3) computations. best procedure, allows determination individual molecular orbitals, is self-consistent method. In great majority theoretical studies—whether or quantum–mechanical—on polypeptides, proteins, constituents peptide bond has considered as planar trans; however, new developments a number directions increased interest taking consideration possible nonplanarity bonds.

参考文章(214)
D. A. Brant, P. R. Schimmel, Analysis of the skeletal configuration of crystalline hen egg-white lysozyme. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 58, pp. 428- 435 ,(1967) , 10.1073/PNAS.58.2.428
D.A. Cook, The relation between amino acid sequence and protein conformation. Journal of Molecular Biology. ,vol. 29, pp. 167- 171 ,(1967) , 10.1016/0022-2836(67)90188-X
E Clementi, D.R Davis, Electronic structure of large molecular systems Journal of Computational Physics. ,vol. 1, pp. 223- 244 ,(1966) , 10.1016/0021-9991(66)90004-0
A. C. Hopkinson, K. Yates, I. G. Csizmadia, Ab Initio LCAO–MO–SCF Calculations on Formic Acid, Formate Ion, and Protonated Formic Acid The Journal of Chemical Physics. ,vol. 52, pp. 1784- 1789 ,(1970) , 10.1063/1.1673218
William Esley. Stewart, Thomas H. Siddall, Nuclear magnetic resonance studies of amides Chemical Reviews. ,vol. 70, pp. 517- 551 ,(1970) , 10.1021/CR60267A001
A. Englert, J. Furnémont, J. Léonis, On the conformation of a segment of carp hemoglobin Macromolecules. ,vol. 4, pp. 768- 769 ,(1971) , 10.1021/MA60024A021
A. B. Biswas, E. W. Hughes, B. D. Sharma, J. N. Wilson, The crystal structure of α-glycylglycine Acta Crystallographica Section B Structural Crystallography and Crystal Chemistry. ,vol. 24, pp. 40- 50 ,(1968) , 10.1107/S0567740868001688
Yasushi Koyama, Takehiko Shimanouchi, Conformations of model compounds of proteins. I. Acetylglycine N-methylamide. Biopolymers. ,vol. 6, pp. 1037- 1076 ,(1968) , 10.1002/BIP.1968.360060804
Michinori Oki, Hiroshi Nakanishi, Conformations of the Esters. II. The Conformation of Alkyl Acetates Bulletin of the Chemical Society of Japan. ,vol. 44, pp. 3144- 3147 ,(1971) , 10.1246/BCSJ.44.3144