Next-generation re-sequencing as a tool for rapid bioinformatic screening of presence and absence of genes and accessory chromosomes across isolates of Zymoseptoria tritici.
作者： Megan C. McDonald , Angela H. Williams , Andrew Milgate , Julie A. Pattemore , Peter S. Solomon
DOI: 10.1016/J.FGB.2015.04.012
关键词:
摘要: The wheat pathogen Zymoseptoria tritici possesses a large number of accessory chromosomes that may be present or absent in its genome. genome the reference isolate IPO323 has been assembled to very high standard and contains 21 full length chromosome sequences, 8 which represent chromosomes. reference, when combined with low-cost next-generation sequencing bioinformatics, can used as powerful tool assess presence absence We an outline range bioinformatics techniques applied analysis presence–absence variation among across 13 novel isolates Z. tritici.
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