Single-Nucleotide Polymorphism (SNP) Analysis to Associate Cancer Risk
作者： Julie Earl , William Greenhalf
DOI: 10.1007/978-1-59745-545-9_10
关键词:
摘要: Identification of hereditary factors that predispose to cancer allows targeted screening and better quantification environmental risk factors. The ability identify which single nucleotide polymorphisms (SNPs) are associated with or segregate disease in families high-risk loci be identified. In this chapter, two platforms for analysing SNPs discussed, the Affymetrix Illumina systems. Application both requires same principles good laboratory practice but there important differences materials methods, will discussed.
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A high-density screen for linkage in multiple sclerosis. American Journal of Human Genetics. ,vol. 77, pp. 454- 467 ,(2005) , 10.1086/444547
RC Green, SA Narod, J Morasse, T-L Young, J Cox, GWN Fitzgerald, P Tonin, O Ginsburg, S Miller, S Jothy, P Poitras, R Laframboise, G Routhier, M Plante, J Morissette, J Weissenbach, EW Khandjian, F Rousseau, Hereditary Nonpolyposis Colon Cancer: Analysis of Linkage to 2p15-16 Places the COCA1 Locus Telomeric to D2S123 and Reveals Genetic Heterogeneity in Seven Canadian Families American Journal of Human Genetics. ,vol. 54, pp. 1067- 1077 ,(1994)
Jian‐Bing Fan, Kevin L. Gunderson, Marina Bibikova, Joanne M. Yeakley, Jing Chen, Eliza Wickham Garcia, Lori L. Lebruska, Marc Laurent, Richard Shen, David Barker, Illumina universal bead arrays. Methods in Enzymology. ,vol. 410, pp. 57- 73 ,(2006) , 10.1016/S0076-6879(06)10003-8
Daniel Pinkel, Richard Segraves, Damir Sudar, Steven Clark, Ian Poole, David Kowbel, Colin Collins, Wen-Lin Kuo, Chira Chen, Ye Zhai, Shanaz H. Dairkee, Britt-marie Ljung, Joe W. Gray, Donna G. Albertson, High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays Nature Genetics. ,vol. 20, pp. 207- 211 ,(1998) , 10.1038/2524
Rebecca Pask, Helen E Rance, Bryan J Barratt, Sarah Nutland, Deborah J Smyth, Meera Sebastian, Rebecca CJ Twells, Anne Smith, Alex C Lam, Luc J Smink, Neil M Walker, John A Todd, Investigating the utility of combining Φ29 whole genome amplification and highly multiplexed single nucleotide polymorphism BeadArray™ genotyping BMC Biotechnology. ,vol. 4, pp. 15- 15 ,(2004) , 10.1186/1472-6750-4-15
Alvis Brazma, Pascal Hingamp, John Quackenbush, Gavin Sherlock, Paul Spellman, Chris Stoeckert, John Aach, Wilhelm Ansorge, Catherine A. Ball, Helen C. Causton, Terry Gaasterland, Patrick Glenisson, Frank C.P. Holstege, Irene F. Kim, Victor Markowitz, John C. Matese, Helen Parkinson, Alan Robinson, Ugis Sarkans, Steffen Schulze-Kremer, Jason Stewart, Ronald Taylor, Jaak Vilo, Martin Vingron, Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nature Genetics. ,vol. 29, pp. 365- 371 ,(2001) , 10.1038/NG1201-365
Christine Lasset, Valérie Bonadona, Prédispositions héréditaires au cancer du sein : après BRCA1 et BRCA2, quel(s) autre(s) gène(s) ? Bulletin Du Cancer. ,vol. 90, pp. 587- 594 ,(2003)
Alex Kartheuser, S West, C Walon, A Curtis, T Hamzehloei, N Lannoy, G Michiels, M Smaers, P Chapman, J Burn, None, The genetic background of familial adenomatous polyposis. Linkage analysis, the APC gene identification and mutation screening. Acta Gastro-enterologica Belgica. ,vol. 58, pp. 433- 451 ,(1995)
M. Schena, D. Shalon, R. W. Davis, P. O. Brown, Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray Science. ,vol. 270, pp. 467- 470 ,(1995) , 10.1126/SCIENCE.270.5235.467
Mukesh Verma, Deepak Kumar, Application of mitochondrial genome information in cancer epidemiology Clinica Chimica Acta. ,vol. 383, pp. 41- 50 ,(2007) , 10.1016/J.CCA.2007.04.018