CbrAB-dependent regulation of pcnB, a poly(A) polymerase gene involved in polyadenylation of RNA in Pseudomonas fluorescens.

作者: Xue-Xian Zhang , Yun-Hao Liu , Paul B. Rainey

DOI: 10.1111/J.1462-2920.2010.02228.X

关键词:

摘要: CbrB is a global sigma(54)-dependent regulator required for nutrient acquisition in Pseudomonas. Located downstream of cbrB on the Pseudomonas fluorescens SBW25 chromosome pcnB, putative poly(A) polymerase gene. Presence sigma(54) promoter intergenic region and pcnB led to hypothesis that regulates expression manner. Here we show transcription dependent. However, 5'-RACE analysis transcript using primers located coding shows starts immediately upstream ATG site at sigma(70)-like promoter. Deletion caused approximately 80% decrease ployadenylated 23S rRNA; growth mutant was compromised range laboratory media sugar beet seedlings. Further confirmed existence predicted Genetic showed drives crcZ, homologue recently described small RNA from aeruginosa, CbrB-dependent Taken together, our data both crcZ are part regulon. Moreover, draw further attention central regulatory role provides link between mRNA degradation cellular catabolism.

参考文章(42)
M Masters, M D Colloms, I R Oliver, L He, E J Macnaughton, Y Charters, The pcnB gene of Escherichia coli, which is required for ColE1 copy number maintenance, is dispensable. Journal of Bacteriology. ,vol. 175, pp. 4405- 4413 ,(1993) , 10.1128/JB.175.14.4405-4413.1993
B. K. Mohanty, S. R. Kushner, Polynucleotide phosphorylase functions both as a 3′ → 5′ exonuclease and a poly(A) polymerase in Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. ,vol. 97, pp. 11966- 11971 ,(2000) , 10.1073/PNAS.220295997
Martin Buck, María-Trinidad Gallegos, David J. Studholme, Yuli Guo, Jay D. Gralla, The Bacterial Enhancer-Dependent ς54(ςN) Transcription Factor Journal of Bacteriology. ,vol. 182, pp. 4129- 4136 ,(2000) , 10.1128/JB.182.15.4129-4136.2000
E. Sonnleitner, L. Abdou, D. Haas, Small RNA as global regulator of carbon catabolite repression in Pseudomonas aeruginosa Proceedings of the National Academy of Sciences of the United States of America. ,vol. 106, pp. 21866- 21871 ,(2009) , 10.1073/PNAS.0910308106
Jane Lopilato, Scott Bortner, Jon Beckwith, Mutations in a new chromosomal gene of Escherichia coli K-12, pcnB, reduce plasmid copy number of pBR322 and its derivatives. Molecular Genetics and Genomics. ,vol. 205, pp. 285- 290 ,(1986) , 10.1007/BF00430440
G. Ditta, S. Stanfield, D. Corbin, D. R. Helinski, Broad host range DNA cloning system for gram-negative bacteria: construction of a gene bank of Rhizobium meliloti. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 77, pp. 7347- 7351 ,(1980) , 10.1073/PNAS.77.12.7347
Renata Moreno, Ana Ruiz-Manzano, Luis Yuste, Fernando Rojo, The Pseudomonas putida Crc global regulator is an RNA binding protein that inhibits translation of the AlkS transcriptional regulator. Molecular Microbiology. ,vol. 64, pp. 665- 675 ,(2007) , 10.1111/J.1365-2958.2007.05685.X
Robert M. Horton, Henry D. Hunt, Steffan N. Ho, Jeffrey K. Pullen, Larry R. Pease, Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene. ,vol. 77, pp. 61- 68 ,(1989) , 10.1016/0378-1119(89)90359-4