Saccharomyces cerevisiae RNA lariat debranching enzyme, Dbr1p, is required for completion of reverse transcription by the retrovirus-like element Ty1 and cleaves branched Ty1 RNAs.

作者: Thomas M Menees

DOI: 10.1007/S00438-020-01753-Y

关键词:

摘要: RNA debranching enzymes are 2'-5' phosphodiesterases found in all eukaryotes. Their main role is cleavage of intron lariat branch points, promoting turnover via exonucleases. Consistent with this role, cells reduced enzyme activity accumulate lariats. The Saccharomyces cerevisiae Dbr1p also a host factor for the yeast long terminal repeat (LTR) retrotransposon Ty1, model many aspects retroviral replication. Fittingly, human Dbr1 immunodeficiency virus, HIV-1. and act at reverse transcription stages Ty1 HIV-1, respectively. Although efficient production full-length cDNA requires Dbr1p, findings reported here indicate that earliest distinct product, minus strand strong stop DNA (-sssDNA), equivalent wild type dbr1∆ mutant cells. Several branched RNAs shown to during retrotransposition. These data consistent creation branches prior their removal by allow extension early products. support possibility formation play broadly shared, but unknown roles LTR transcription.

参考文章(69)
Laura A. Salem, Christopher L. Boucher, Thomas M. Menees, Relationship between RNA Lariat Debranching and Ty1 Element Retrotransposition Journal of Virology. ,vol. 77, pp. 12795- 12806 ,(2003) , 10.1128/JVI.77.23.12795-12806.2003
Eugene Berezikov, Wei-Jen Chung, Jason Willis, Edwin Cuppen, Eric C. Lai, Mammalian mirtron genes. Molecular Cell. ,vol. 28, pp. 328- 336 ,(2007) , 10.1016/J.MOLCEL.2007.09.028
MARC SPINGOLA, LESLIE GRATE, DAVID HAUSSLER, MANUEL ARES, Genome-wide bioinformatic and molecular analysis of introns in Saccharomyces cerevisiae. RNA. ,vol. 5, pp. 221- 234 ,(1999) , 10.1017/S1355838299981682
Aziz El Hage, Shaun Webb, Alastair Kerr, David Tollervey, Genome-Wide Distribution of RNA-DNA Hybrids Identifies RNase H Targets in tRNA Genes, Retrotransposons and Mitochondria PLoS Genetics. ,vol. 10, pp. e1004716- ,(2014) , 10.1371/JOURNAL.PGEN.1004716
Z. Zhang, J. R. Hesselberth, S. Fields, Genome-wide identification of spliced introns using a tiling microarray Genome Research. ,vol. 17, pp. 503- 509 ,(2007) , 10.1101/GR.6049107
A. E. Galvis, H. E. Fisher, T. Nitta, H. Fan, D. Camerini, Impairment of HIV-1 cDNA Synthesis by DBR1 Knockdown Journal of Virology. ,vol. 88, pp. 7054- 7069 ,(2014) , 10.1128/JVI.00704-14
Ying Ye, Jessica De Leon, Noriko Yokoyama, Yathi Naidu, David Camerini, DBR1 siRNA inhibition of HIV-1 replication Retrovirology. ,vol. 2, pp. 63- 63 ,(2005) , 10.1186/1742-4690-2-63
Mary Bryk, Mukti Banerjee, Darryl Conte, M. Joan Curcio, The Sgs1 Helicase of Saccharomyces cerevisiae Inhibits Retrotransposition of Ty1 Multimeric Arrays Molecular and Cellular Biology. ,vol. 21, pp. 5374- 5388 ,(2001) , 10.1128/MCB.21.16.5374-5388.2001
Tom Maniatis, Joseph Sambrook, E. F. Fritsch, Molecular Cloning: A Laboratory Manual ,(2001)