Molecular basis for nanoscopic membrane curvature generation from quantum mechanical models and synthetic transporter sequences.

作者: Nathan W. Schmidt , Michael Lis , Kun Zhao , Ghee Hwee Lai , Anastassia N. Alexandrova

DOI: 10.1021/JA308459J

关键词:

摘要: We investigate the physical origin of peptide-induced membrane curvature by contrasting differences between H-bonding interactions prototypical cationic amino acids, arginine (Arg) and lysine (Lys), with phosphate groups phospholipid heads using quantum mechanical (QM) calculations a minimum model test results via synthetic oxaorbornene-based transporter sequences without geometric constraints polypeptide backbones. QM suggest that although individual Lys can in principle coordinate two phosphates, they are not able to do so at small inter-Lys distances drastic energetic penalties. In contrast, Arg phosphates down less than 5 A, where guanidinium stack “face face”. agreement these observations, poly-Lys cannot generate nanoscale positive necessary for inducing negative Gaussian curvature, contrast poly-Arg. Also consistent calculations, polyguanidine-oxanorbornene homopolymers (PGO...

参考文章(73)
Maite Lewin, Nadia Carlesso, Ching-Hsuan Tung, Xiao-Wu Tang, David Cory, David T Scadden, Ralph Weissleder, None, Tat peptide-derivatized magnetic nanoparticles allow in vivo tracking and recovery of progenitor cells. Nature Biotechnology. ,vol. 18, pp. 410- 414 ,(2000) , 10.1038/74464
Frederic Heitz, May Catherine Morris, Gilles Divita, Twenty years of cell-penetrating peptides: from molecular mechanisms to therapeutics British Journal of Pharmacology. ,vol. 157, pp. 195- 206 ,(2009) , 10.1111/J.1476-5381.2009.00057.X
G. A. Papoian, J. Ulander, M. P. Eastwood, Z. Luthey-Schulten, P. G. Wolynes, Water in protein structure prediction Proceedings of the National Academy of Sciences of the United States of America. ,vol. 101, pp. 3352- 3357 ,(2004) , 10.1073/PNAS.0307851100
Jonathan B. Rothbard, Theodore C. Jessop, Richard S. Lewis, Bryce A. Murray, Paul A. Wender, Role of membrane potential and hydrogen bonding in the mechanism of translocation of guanidinium-rich peptides into cells. Journal of the American Chemical Society. ,vol. 126, pp. 9506- 9507 ,(2004) , 10.1021/JA0482536
Paul E. Harper, David A. Mannock, Ruthven N.A.H. Lewis, Ronald N. McElhaney, Sol M. Gruner, X-Ray Diffraction Structures of Some Phosphatidylethanolamine Lamellar and Inverted Hexagonal Phases* Biophysical Journal. ,vol. 81, pp. 2693- 2706 ,(2001) , 10.1016/S0006-3495(01)75912-7
Jiří Vondrášek, Philip E. Mason, Jan Heyda, Kim D. Collins, Pavel Jungwirth, The molecular origin of like-charge arginine-arginine pairing in water. Journal of Physical Chemistry B. ,vol. 113, pp. 9041- 9045 ,(2009) , 10.1021/JP902377Q
Jacob M. Gump, Steven F. Dowdy, TAT transduction: the molecular mechanism and therapeutic prospects Trends in Molecular Medicine. ,vol. 13, pp. 443- 448 ,(2007) , 10.1016/J.MOLMED.2007.08.002
Martin Head-Gordon, John A. Pople, Michael J. Frisch, MP2 energy evaluation by direct methods Chemical Physics Letters. ,vol. 153, pp. 503- 506 ,(1988) , 10.1016/0009-2614(88)85250-3
Michael E Selsted, Andre J Ouellette, Mammalian defensins in the antimicrobial immune response Nature Immunology. ,vol. 6, pp. 551- 557 ,(2005) , 10.1038/NI1206