Gut microflora may facilitate adaptation to anthropic habitat: A comparative study in Rattus.

作者: Amruta Varudkar , Uma Ramakrishnan

DOI: 10.1002/ECE3.4040

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摘要: Anthropophilic species ("commensal" species) that are completely dependent upon anthropic habitats experience different selective pressures particularly in terms of food than their noncommensal counterparts. Using a next-generation sequencing approach, we characterized and compared the gut microflora community 53 commensal Rattus rattus 59 satarae captured 10 locations Western Ghats, India. We observed that, while identity was important characterizing communities two hosts, environmental factors also had significant effect. While there geographic variation R. satarae, no effect distance on R. rattus. Interestingly, host genetic did not significantly influence either hosts. Collectively, these results indicate shift habitat is likely to result change imply complex trait, influenced by various parameters habitats.

参考文章(71)
Jingjing Wang, Huang Tang, Chenhong Zhang, Yufeng Zhao, Muriel Derrien, Emilie Rocher, Johan ET van-Hylckama Vlieg, Katherine Strissel, Liping Zhao, Martin Obin, Jian Shen, Modulation of gut microbiota during probiotic-mediated attenuation of metabolic syndrome in high fat diet-fed mice The ISME Journal. ,vol. 9, pp. 1- 15 ,(2015) , 10.1038/ISMEJ.2014.99
Ken P Aplin, Hitoshi Suzuki, Alejandro A Chinen, R Terry Chesser, José Ten Have, Stephen C Donnellan, Jeremy Austin, Angela Frost, Jean Paul Gonzalez, Vincent Herbreteau, Francois Catzeflis, Julien Soubrier, Yin-Ping Fang, Judith Robins, Elizabeth Matisoo-Smith, Amanda DS Bastos, Ibnu Maryanto, Martua H Sinaga, Christiane Denys, Ronald A Van Den Bussche, Chris Conroy, Kevin Rowe, Alan Cooper, None, Multiple Geographic Origins of Commensalism and Complex Dispersal History of Black Rats PLoS ONE. ,vol. 6, pp. e26357- ,(2011) , 10.1371/JOURNAL.PONE.0026357
Clarissa Schwab, Bogdan Cristescu, Joseph M. Northrup, Gordon B. Stenhouse, Michael Gänzle, Diet and Environment Shape Fecal Bacterial Microbiota Composition and Enteric Pathogen Load of Grizzly Bears PLoS ONE. ,vol. 6, pp. e27905- ,(2011) , 10.1371/JOURNAL.PONE.0027905
Catherine A. Lozupone, Rob Knight, Species divergence and the measurement of microbial diversity Fems Microbiology Reviews. ,vol. 32, pp. 557- 578 ,(2008) , 10.1111/J.1574-6976.2008.00111.X
Ruth M. Kennan, Marianne Gilhuus, Sara Frosth, Torsten Seemann, Om P. Dhungyel, Richard J. Whittington, John D. Boyce, David R. Powell, Anna Aspán, Hannah J. Jørgensen, Dieter M. Bulach, Julian I. Rood, Genomic Evidence for a Globally Distributed, Bimodal Population in the Ovine Footrot Pathogen Dichelobacter nodosus Mbio. ,vol. 5, pp. 1- 11 ,(2014) , 10.1128/MBIO.01821-14
C.-C. Chu, J. L. Spencer, M. J. Curzi, J. A. Zavala, M. J. Seufferheld, Gut bacteria facilitate adaptation to crop rotation in the western corn rootworm. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 110, pp. 11917- 11922 ,(2013) , 10.1073/PNAS.1301886110
J Gregory Caporaso, Justin Kuczynski, Jesse Stombaugh, Kyle Bittinger, Frederic D Bushman, Elizabeth K Costello, Noah Fierer, Antonio Gonzalez Peña, Julia K Goodrich, Jeffrey I Gordon, Gavin A Huttley, Scott T Kelley, Dan Knights, Jeremy E Koenig, Ruth E Ley, Catherine A Lozupone, Daniel McDonald, Brian D Muegge, Meg Pirrung, Jens Reeder, Joel R Sevinsky, Peter J Turnbaugh, William A Walters, Jeremy Widmann, Tanya Yatsunenko, Jesse Zaneveld, Rob Knight, QIIME allows analysis of high-throughput community sequencing data Nature Methods. ,vol. 7, pp. 335- 336 ,(2010) , 10.1038/NMETH.F.303
Sébastien Boutin, Christopher Sauvage, Louis Bernatchez, Céline Audet, Nicolas Derome, Inter individual variations of the fish skin microbiota: host genetics basis of mutualism? PLOS ONE. ,vol. 9, ,(2014) , 10.1371/JOURNAL.PONE.0102649