Interactions of the "piano-stool" [ruthenium(II)(η(6) -arene)(quinolone)Cl](+) complexes with water; DFT computational study.

作者: Tereza Zábojníková , Radim Cajzl , Jakob Kljun , Zdeněk Chval , Iztok Turel

DOI: 10.1002/JCC.24373

关键词:

摘要: Full optimizations of stationary points along the reaction coordinate for hydration several quinolone Ru(II) half-sandwich complexes were performed in water environment using B3PW91/6-31+G(d)/PCM/UAKS method. The role diffuse functions (especially on oxygen) was found crucial correct geometries coordinate. Single-point (SP) calculations at B3LYP/6-311++G(2df,2pd)/DPCM/saled-UAKS level. In first part, two possible mechanisms-associative and dissociative compared. It that mechanism process is kinetically slightly preferred. Another important conclusion concerns channels. substitution chloride ligand (abbreviated text as dechlorination reaction) represents energetically most feasible pathway. second part same explored reactivity comparison Ru(II)-complexes with derivatives nalidixic acid: cinoxacin, ofloxacin, (thio)nalidixic acid. about four orders magnitude faster a basic solution compared to neutral/acidic cinoxacin acid reactive former latter environments, respectively. all cases endergonic; nevertheless endergonicity substantially lower (by ∼6 kcal/mol) environment. © 2016 Wiley Periodicals, Inc.

参考文章(96)
Małgorzata Brindell, Karol Dyduch, Agnieszka Adamowicz, Elżbieta Urbanowicz, Maria Oszajca, Artur Michalak, Grażyna Stochel, Rudi van Eldik, Base‐Catalyzed Hydrolysis of a RuII–Chloro–dmso Complex and Its Reactivity towards L‐Methionine European Journal of Inorganic Chemistry. ,vol. 2014, pp. 1333- 1344 ,(2014) , 10.1002/EJIC.201301154
R E Aird, J Cummings, A A Ritchie, M Muir, R E Morris, H Chen, P J Sadler, D I Jodrell, In vitro and in vivo activity and cross resistance profiles of novel ruthenium (II) organometallic arene complexes in human ovarian cancer. British Journal of Cancer. ,vol. 86, pp. 1652- 1657 ,(2002) , 10.1038/SJ.BJC.6600290
Riccardo Pettinari, Fabio Marchetti, Francesca Condello, Claudio Pettinari, Giulio Lupidi, Rosario Scopelliti, Suman Mukhopadhyay, Tina Riedel, Paul J. Dyson, Ruthenium(II)–Arene RAPTA Type Complexes Containing Curcumin and Bisdemethoxycurcumin Display Potent and Selective Anticancer Activity Organometallics. ,vol. 33, pp. 3709- 3715 ,(2014) , 10.1021/OM500317B
Roman F. Nalewajski, Janusz Mrozek, Modified valence indices from the two‐particle density matrix International Journal of Quantum Chemistry. ,vol. 51, pp. 187- 200 ,(1994) , 10.1002/QUA.560510403
Susan J. Berners-Price, Peter J. Sadler, Coordination chemistry of metallodrugs: insights into biological speciation from NMR spectroscopy☆ Coordination Chemistry Reviews. ,vol. 151, pp. 1- 40 ,(1996) , 10.1016/S0010-8545(96)90191-5
Shaun T. Mutter, James A. Platts, Density functional theory studies of interactions of ruthenium-arene complexes with base pair steps. Journal of Physical Chemistry A. ,vol. 115, pp. 11293- 11302 ,(2011) , 10.1021/JP2049487
Tomáš Zimmermann, Michal Zeizinger, Jaroslav V. Burda, Cisplatin interaction with cysteine and methionine, a theoretical DFT study. Journal of Inorganic Biochemistry. ,vol. 99, pp. 2184- 2196 ,(2005) , 10.1016/J.JINORGBIO.2005.07.021
Katrin Gisselfält, Per Lincoln, Bengt Nordén, Mats Jonsson, Interactions of Tris(phenanthroline)ruthenium(II) Enantiomers with DNA: Effects on Helix Flexibility Studied by the Electrophoretic Behavior of Reptating DNA in Agarose Gel† Journal of Physical Chemistry B. ,vol. 104, pp. 3651- 3659 ,(2000) , 10.1021/JP993369N
Jana Kašpárková, Fiona S. Mackay, Viktor Brabec, Peter J. Sadler, Formation of platinated GG cross-links on DNA by photoactivation of a platinum(IV) azide complex. Journal of Biological Inorganic Chemistry. ,vol. 8, pp. 741- 745 ,(2003) , 10.1007/S00775-003-0474-3