Toward Personalized Lymphoma Immunotherapy: Identification of Common Driver Mutations Recognized by Patient CD8+ T Cells

作者: Julie S. Nielsen , Colin G. Sedgwick , Aniqa Shahid , Zusheng Zong , Zabrina L. Brumme

DOI: 10.1158/1078-0432.CCR-15-2023

关键词:

摘要: Purpose: A fundamental challenge in the era of next-generation sequencing (NGS) is to design effective treatments tailored mutational profiles tumors. Many newly discovered cancer mutations are difficult target pharmacologically; however, T-cell–based therapies may provide a valuable alternative owing exquisite sensitivity and specificity antigen recognition. To explore this concept, we assessed immunogenicity panel genes that common sites driver follicular lymphoma, an immunologically sensitive yet currently incurable disease. Experimental Design: Exon capture NGS were used interrogate tumor samples from 53 patients with lymphoma for 10 frequently mutated genes. For 13 patients, predicted mutant peptides proteins evaluated recognition by autologous peripheral blood T cells after vitro priming. Results: Mutations identified 1–5 81% (43/53) samples. Autologous, mutation-specific CD8 + 23% (3/13) cases. T-cell responses directed toward putative CREBBP MEF2B. Responding showed versus wild-type recognized expressing appropriate mutations. appeared be naive repertoire, as they found at low frequencies only single time points each patient. Conclusions: Patients harbor rare functionally competent specific recurrent Our results support concept using individualized immunotherapies targeting other malignancies. Clin Cancer Res; 22(9); 2226–36. ©2015 AACR .

参考文章(50)
Julia R. Pon, Jackson Wong, Saeed Saberi, Olivia Alder, Michelle Moksa, S. -W. Grace Cheng, Gregg B. Morin, Pamela A. Hoodless, Martin Hirst, Marco A. Marra, MEF2B mutations in non-Hodgkin lymphoma dysregulate cell migration by decreasing MEF2B target gene activation Nature Communications. ,vol. 6, pp. 7953- 7953 ,(2015) , 10.1038/NCOMMS8953
Sandra J. Horning, Saul A. Rosenberg, The natural history of initially untreated low-grade non-Hodgkin's lymphomas. The New England Journal of Medicine. ,vol. 311, pp. 1471- 1475 ,(1984) , 10.1056/NEJM198412063112303
Julie S. Nielsen, Spencer D. Martin, Brad H. Nelson, Personalized Immunotherapy Targeting the Cancer Mutanome Reference Module in Biomedical Sciences#R##N#Encyclopedia of Immunobiology. pp. 426- 433 ,(2016) , 10.1016/B978-0-12-374279-7.17006-7
Boris Linard, Stéphane Bézieau, Houssem Benlalam, Nathalie Labarrière, Yannick Guilloux, Elisabeth Diez, Francine Jotereau, A ras-Mutated Peptide Targeted by CTL Infiltrating a Human Melanoma Lesion Journal of Immunology. ,vol. 168, pp. 4802- 4808 ,(2002) , 10.4049/JIMMUNOL.168.9.4802
Feriyl Bhaijee, Thomas Huebner, Ralph H. Hruban, Laura D. Wood, Nathan Cuka, Drew M. Pardoll, Nickolas Papadopoulos, Kenneth W. Kinzler, Shibin Zhou, Toby C. Cornish, Janis M. Taube, Robert A. Anders, James R. Eshleman, Bert Vogelstein, Luis A. Diaz, Dung T. Le, Jennifer N. Uram, Hao Wang, Bjarne R. Bartlett, Holly Kemberling, Aleksandra D. Eyring, Andrew D. Skora, Brandon S. Luber, Nilofer S. Azad, Dan Laheru, Barbara Biedrzycki, Ross C. Donehower, Atif Zaheer, George A. Fisher, Todd S. Crocenzi, James J. Lee, Steven M. Duffy, Richard M. Goldberg, Albert de la Chapelle, Minori Koshiji, PD-1 Blockade in Tumors with Mismatch-Repair Deficiency The New England Journal of Medicine. ,vol. 372, pp. 2509- 2520 ,(2015) , 10.1056/NEJMOA1500596
James N. Kochenderfer, Mark E. Dudley, Steven A. Feldman, Wyndham H. Wilson, David E. Spaner, Irina Maric, Maryalice Stetler-Stevenson, Giao Q. Phan, Marybeth S. Hughes, Richard M. Sherry, James C. Yang, Udai S. Kammula, Laura Devillier, Robert Carpenter, Debbie-Ann N. Nathan, Richard A. Morgan, Carolyn Laurencot, Steven A. Rosenberg, B-cell depletion and remissions of malignancy along with cytokine-associated toxicity in a clinical trial of anti-CD19 chimeric-antigen-receptor–transduced T cells Blood. ,vol. 119, pp. 2709- 2720 ,(2012) , 10.1182/BLOOD-2011-10-384388
Pia Kvistborg, Daisy Philips, Sander Kelderman, Lois Hageman, Christian Ottensmeier, Deborah Joseph-Pietras, Marij JP Welters, Sjoerd van der Burg, Ellen Kapiteijn, Olivier Michielin, Emanuela Romano, Carsten Linnemann, Daniel Speiser, Christian Blank, John B Haanen, Ton N Schumacher, Anti-CTLA-4 therapy broadens the melanoma-reactive CD8+ T cell response. Science Translational Medicine. ,vol. 6, ,(2014) , 10.1126/SCITRANSLMED.3008918
R. Eric Davis, Vu N. Ngo, Georg Lenz, Pavel Tolar, Ryan M. Young, Paul B. Romesser, Holger Kohlhammer, Laurence Lamy, Hong Zhao, Yandan Yang, Weihong Xu, Arthur L. Shaffer, George Wright, Wenming Xiao, John Powell, Jian-kang Jiang, Craig J. Thomas, Andreas Rosenwald, German Ott, Hans Konrad Muller-Hermelink, Randy D. Gascoyne, Joseph M. Connors, Nathalie A. Johnson, Lisa M. Rimsza, Elias Campo, Elaine S. Jaffe, Wyndham H. Wilson, Jan Delabie, Erlend B. Smeland, Richard I. Fisher, Rita M. Braziel, Raymond R. Tubbs, J. R. Cook, Dennis D. Weisenburger, Wing C. Chan, Susan K. Pierce, Louis M. Staudt, Chronic active B-cell-receptor signalling in diffuse large B-cell lymphoma Nature. ,vol. 463, pp. 88- 92 ,(2010) , 10.1038/NATURE08638
Laura A. Cotton, Manal Abdur Rahman, Carmond Ng, Anh Q. Le, M-J Milloy, Theresa Mo, Zabrina L. Brumme, HLA class I sequence-based typing using DNA recovered from frozen plasma Journal of Immunological Methods. ,vol. 382, pp. 40- 47 ,(2012) , 10.1016/J.JIM.2012.05.003