Quality control procedures for genome-wide association studies.

作者: Marylyn D. Ritchie , Stephen Turner , Loren L. Armstrong , Yuki Bradford , Christopher S. Carlson

DOI: 10.1002/0471142905.HG0119S68

关键词:

摘要: … All of these data have been deposited in dbGaP along with corresponding quality control … Finally, this review has focused on the quality control of GWAS data, which typically only …

参考文章(44)
Kelli Ryckman, Scott M. Williams, Calculation and Use of the Hardy‐Weinberg Model in Association Studies Current protocols in human genetics. ,vol. 57, ,(2008) , 10.1002/0471142905.HG0118S57
Marylyn D. Ritchie, Justin Giles, Benjamin J. Grady, Scott M. Dudek, David Sexton, Eric Torstenson, FINDING UNIQUE FILTER SETS IN PLATO: A PRECURSOR TO EFFICIENT INTERACTION ANALYSIS IN GWAS DATA pacific symposium on biocomputing. pp. 315- 326 ,(2010)
Karl W. Broman, Cleaning genotype data. Genetic Epidemiology. ,vol. 17, ,(1999) , 10.1002/GEPI.1370170714
SLCO1B1 variants and statin-induced myopathy--a genomewide study The New England Journal of Medicine. ,vol. 359, pp. 789- 799 ,(2008) , 10.1056/NEJMOA0801936
Timothy M. Frayling, Genome–wide association studies provide new insights into type 2 diabetes aetiology Nature Reviews Genetics. ,vol. 8, pp. 657- 662 ,(2007) , 10.1038/NRG2178
Tony Dadd, Michael E. Weale, Cathryn M. Lewis, A critical evaluation of genomic control methods for genetic association studies Genetic Epidemiology. ,vol. 33, pp. 290- 298 ,(2009) , 10.1002/GEPI.20379
Jonathan Marchini, Lon R Cardon, Michael S Phillips, Peter Donnelly, None, The effects of human population structure on large genetic association studies. Nature Genetics. ,vol. 36, pp. 512- 517 ,(2004) , 10.1038/NG1337
Stephen J Chanock, Teri Manolio, Michael Boehnke, Eric Boerwinkle, David J Hunter, Gilles Thomas, Joel N Hirschhorn, Gonçalo R Abecasis, David Altshuler, Joan E Bailey-Wilson, Lisa D Brooks, Lon R Cardon, Mark Daly, Peter Donnelly, Joseph F Fraumeni Jr, Nelson B Freimer, Daniela S Gerhard, Chris Gunter, Alan E Guttmacher, Mark S Guyer, Emily L Harris, Josephine Hoh, Robert Hoover, C Augustine Kong, Kathleen R Merikangas, Cynthia C Morton, Lyle J Palmer, Elizabeth G Phimister, John P Rice, Jerry Roberts, Charles Rotimi, Margaret A Tucker, Kyle J Vogan, Sholom Wacholder, Ellen M Wijsman, Deborah M Winn, Francis S Collins, Replicating genotype–phenotype associations Nature. ,vol. 447, pp. 655- 660 ,(2007) , 10.1038/447655A
Hua Tang, Tom Quertermous, Beatriz Rodriguez, Sharon L.R. Kardia, Xiaofeng Zhu, Andrew Brown, James S. Pankow, Michael A. Province, Steven C. Hunt, Eric Boerwinkle, Nicholas J. Schork, Neil J. Risch, Genetic Structure, Self-Identified Race/Ethnicity, and Confounding in Case-Control Association Studies American Journal of Human Genetics. ,vol. 76, pp. 268- 275 ,(2005) , 10.1086/427888
Ann K Daly, , Peter T Donaldson, Pallav Bhatnagar, Yufeng Shen, Itsik Pe'er, Aris Floratos, Mark J Daly, David B Goldstein, Sally John, Matthew R Nelson, Julia Graham, B Kevin Park, John F Dillon, William Bernal, Heather J Cordell, Munir Pirmohamed, Guruprasad P Aithal, Christopher P Day, , HLA-B*5701 genotype is a major determinant of drug-induced liver injury due to flucloxacillin. Nature Genetics. ,vol. 41, pp. 816- 819 ,(2009) , 10.1038/NG.379