Docking scores and QSAR using evolved neural networks for the Pan-inhibition of wild-type and mutant PfDHFR by cycloguanil derivatives

作者: David Hecht , Mars Cheung , Gary B. Fogel

DOI: 10.1109/CEC.2009.4982957

关键词:

摘要: Linear and nonlinear quantitative structure-activity relationship (QSAR) models docking score functions were developed for dihydrofolate reductase (DHFR) inhibition by cycloguanil derivatives using small molecule descriptors derived from MOE in silico energies. The best QSAR identified when artificial neural networks optimized evolutionary computation. resulting can be used to identify key DHFR are useful high-throughput screening of novel drug compounds.

参考文章(41)
Glen E. Kellogg, Simon F. Semus, 3D QSAR in modern drug design. EXS. pp. 223- 241 ,(2003) , 10.1007/978-3-0348-7997-2_11
David W. Corne, Gary B. Fogel, Evolutionary Computation In Bioinformatics ,(2003)
Mehran Yazdanian, Susan L. Glynn, James L. Wright, Amale Hawi, Correlating Partitioning and caco-2 Cell Permeability of Structurally Diverse Small Molecular Weight Compounds Pharmaceutical Research. ,vol. 15, pp. 1490- 1494 ,(1998) , 10.1023/A:1011930411574
Sung-Sau So, Martin Karplus, Evolutionary optimization in quantitative structure-activity relationship: an application of genetic neural networks. Journal of Medicinal Chemistry. ,vol. 39, pp. 1521- 1530 ,(1996) , 10.1021/JM9507035
P. Kongsaeree, P. Khongsuk, U. Leartsakulpanich, P. Chitnumsub, B. Tarnchompoo, M. D. Walkinshaw, Y. Yuthavong, Crystal structure of dihydrofolate reductase from Plasmodium vivax: pyrimethamine displacement linked with mutation-induced resistance. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 102, pp. 13046- 13051 ,(2005) , 10.1073/PNAS.0501747102
Stefan P Niculescu, Artificial neural networks and genetic algorithms in QSAR Journal of Molecular Structure-theochem. ,vol. 622, pp. 71- 83 ,(2003) , 10.1016/S0166-1280(02)00619-X
John E. Hyde, Mechanisms of resistance of Plasmodium falciparum to antimalarial drugs. Microbes and Infection. ,vol. 4, pp. 165- 174 ,(2002) , 10.1016/S1286-4579(01)01524-6
Douglas B. Kitchen, Hélène Decornez, John R. Furr, Jürgen Bajorath, Docking and scoring in virtual screening for drug discovery: methods and applications Nature Reviews Drug Discovery. ,vol. 3, pp. 935- 949 ,(2004) , 10.1038/NRD1549