The Ubiquitin System, an Immense Realm

作者: Alexander Varshavsky

DOI: 10.1146/ANNUREV-BIOCHEM-051910-094049

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摘要: Among the functions of intracellular proteolysis are elimination misfolded or otherwise abnormal proteins; maintenance amino acid pools in cells affected by stresses, such as starvation; and generation protein fragments that act hormones, antigens, other effectors. Many proteins either conditionally constitutively short-lived, with vivo half-lives can be brief a few minutes. In some cases, proteolytic pathway targets destroys cotranslationally, i.e., an emerging polypeptide chain degraded while it is still ribosome-associated peptidyl-tRNA (1, 2). The regulated processive degradation carried out largely ubiquitin (Ub)- proteasome system (Ub system), conjunction molecular chaperones, autophagy, lysosomal proteolysis. Other mediators of intracellular include proteases caspases, calpains, separases. These nonprocessive function “upstream” components Ub system, generating targeted to short peptides Ub-mediated pathways. Proteins damaged, misfolded, often recognized selectively destroyed system. Physiologically important exceptions conformationally perturbed and/or their aggregates harmful but cannot efficaciously repaired removed. resulting proteotoxicity underlies both aging specific diseases, including neurodegeneration.

参考文章(86)
Alexander Varshavsky, Discovery of Cellular Regulation by Protein Degradation Journal of Biological Chemistry. ,vol. 283, pp. 34469- 34489 ,(2008) , 10.1074/JBC.X800009200
Glenn C Turner, Alexander Varshavsky, Detecting and Measuring Cotranslational Protein Degradation in Vivo Science. ,vol. 289, pp. 2117- 2120 ,(2000) , 10.1126/SCIENCE.289.5487.2117
Frederik Eisele, Dieter H. Wolf, Degradation of misfolded protein in the cytoplasm is mediated by the ubiquitin ligase Ubr1 FEBS Letters. ,vol. 582, pp. 4143- 4146 ,(2008) , 10.1016/J.FEBSLET.2008.11.015
Shruthi S. Vembar, Jeffrey L. Brodsky, One step at a time: endoplasmic reticulum-associated degradation Nature Reviews Molecular Cell Biology. ,vol. 9, pp. 944- 957 ,(2008) , 10.1038/NRM2546
Alexander Varshavsky, The N-end rule pathway and regulation by proteolysis Protein Science. ,vol. 20, pp. 1298- 1345 ,(2011) , 10.1002/PRO.666
Dawn M. Wenzel, Kate E. Stoll, Rachel E. Klevit, E2s: structurally economical and functionally replete. Biochemical Journal. ,vol. 433, pp. 31- 42 ,(2011) , 10.1042/BJ20100985
Zanxian Xia, Ailsa Webster, Fangyong Du, Konstantin Piatkov, Michel Ghislain, Alexander Varshavsky, Substrate-binding Sites of UBR1, the Ubiquitin Ligase of the N-end Rule Pathway Journal of Biological Chemistry. ,vol. 283, pp. 24011- 24028 ,(2008) , 10.1074/JBC.M802583200
Cheol-Sang Hwang, Maja Sukalo, Olga Batygin, Marie-Claude Addor, Han Brunner, Antonio Perez Aytes, Julia Mayerle, Hyun Kyu Song, Alexander Varshavsky, Martin Zenker, Ubiquitin ligases of the N-end rule pathway: assessment of mutations in UBR1 that cause the Johanson-Blizzard syndrome. PLOS ONE. ,vol. 6, ,(2011) , 10.1371/JOURNAL.PONE.0024925
Daniel Finley, Recognition and Processing of Ubiquitin-Protein Conjugates by the Proteasome Annual Review of Biochemistry. ,vol. 78, pp. 477- 513 ,(2009) , 10.1146/ANNUREV.BIOCHEM.78.081507.101607
Tania A. Baker, Robert T. Sauer, ATP-dependent proteases of bacteria: recognition logic and operating principles. Trends in Biochemical Sciences. ,vol. 31, pp. 647- 653 ,(2006) , 10.1016/J.TIBS.2006.10.006