Crystal structure of the nitrogenase iron protein from Azotobacter vinelandii

作者: Millie M. Georgiadis , Pinak Chakrabarti , Douglas C. Rees

DOI: 10.1007/978-1-4684-6432-0_12

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摘要: The nitrogenase enzyme system consists of two component proteins, an iron (Fe-) protein and a molybdenum-iron (MoFe)-protein. Prior to substrate reduction, electrons are transferred from Fe-protein MoFe-protein in ATP-dependent process. coupling ATP hydrolysis electron transfer is mediated by Fe-protein, which the only known reductant supporting catalytic activity (8). dimer identical 32kDa subunits, sequences highly conserved both conventional alternate nitrogenases diverse group prokaryotes. symmetrically binds one 4Fe-4S cluster Cys 97 132 each subunit (sequence numbering Azotobacter vinelandii Fe-protein) (2,4). Unusual aspects include ATP-electron unique environment, unlike any observed ferredoxin structures. To address structural basis these properties, we have determined crystal structure A. at 3.0A resolution. At present, 247 289 residues been modeled as poly-alanine chain, detailed fitting actual side chains progress. current model sufficient begin addressing questions concerning overall shape fold protein, environment cluster, probable nucleotide binding site, site(s) interaction with MoFe-protein, interactions interface.

参考文章(12)
T. V. Morgan, J. McCracken, W. H. Orme-Johnson, W. B. Mims, L. E. Mortenson, J. Peisach, Pulsed electron paramagnetic resonance studies of the interaction of Mg-ATP and D2O with the iron protein of nitrogenase. Biochemistry. ,vol. 29, pp. 3077- 3082 ,(1990) , 10.1021/BI00464A026
A Willing, J B Howard, Cross-linking site in Azotobacter vinelandii complex. Journal of Biological Chemistry. ,vol. 265, pp. 6596- 6599 ,(1990) , 10.1016/S0021-9258(19)39189-6
A H Willing, M M Georgiadis, D C Rees, J B Howard, Cross-linking of nitrogenase components. Structure and activity of the covalent complex. Journal of Biological Chemistry. ,vol. 264, pp. 8499- 8503 ,(1989) , 10.1016/S0021-9258(18)81819-1
Bi-Cheng Wang, Resolution of phase ambiguity in macromolecular crystallography. Methods in Enzymology. ,vol. 115, pp. 90- 112 ,(1985) , 10.1016/0076-6879(85)15009-3
J B Howard, R Davis, B Moldenhauer, V L Cash, D Dean, Fe:S cluster ligands are the only cysteines required for nitrogenase Fe-protein activities. Journal of Biological Chemistry. ,vol. 264, pp. 11270- 11274 ,(1989) , 10.1016/S0021-9258(18)60459-4
Wayne A. Hendrickson, Stereochemically restrained refinement of macromolecular structures. Methods in Enzymology. ,vol. 115, pp. 252- 270 ,(1985) , 10.1016/0076-6879(85)15021-4
Jacques Meyer, Jacques Gaillard, Jean Marc Moulis, Hydrogen-1 nuclear magnetic resonance of the nitrogenase iron protein (Cp2) from Clostridium pasteurianum Biochemistry. ,vol. 27, pp. 6150- 6156 ,(1988) , 10.1021/BI00416A048
Rik K. Wierenga, Peter Terpstra, Wim G.J. Hol, Prediction of the Occurrence of the ADP-binding βαβ-fold in Proteins, Using an Amino Acid Sequence Fingerprint Journal of Molecular Biology. ,vol. 187, pp. 101- 107 ,(1986) , 10.1016/0022-2836(86)90409-2
M. R. Pope, S. A. Murrell, P. W. Ludden, Covalent modification of the iron protein of nitrogenase from Rhodospirillum rubrum by adenosine diphosphoribosylation of a specific arginine residue Proceedings of the National Academy of Sciences of the United States of America. ,vol. 82, pp. 3173- 3177 ,(1985) , 10.1073/PNAS.82.10.3173