Upland soil cluster γ dominates the methanotroph communities in the karst Heshang Cave.

作者: Rui Zhao , Hongmei Wang , Xiaoyu Cheng , Yuan Yun , Xuan Qiu

DOI: 10.1093/FEMSEC/FIY192

关键词:

摘要: Microorganisms are thought to play a critical role in methane (CH4) consumption karst caves and yet the presence diversity of methane-oxidizing bacteria (MOB) remain mystery. In Heshang Cave, CH4 concentration decreases from 1.9 ppm at entrance 0.65 inside cave. To explore MOB this cave, weathered rocks sediment samples were collected cave subjected molecular analysis. The abundances 107-108 copies g-1 dry sample via quantification pmoA gene, which comparable or even higher than those reported other terrestrial environments, account for up 20% total microbial communities. Phylogenetically, communities dominated by 'high-affinity' upland soil cluster γ (USCγ), although predominance Type Ia was also detected permanently waterlogged stream sediment. estimated oxidation potential varied dramatically among range 0.6-80 m-3 d-1. Collectively, study provides compelling evidence that high-affinity capable oxidizing atmospheric level present may an important consumption, supports as sinks.

参考文章(79)
Tanja Shabarova, Franco Widmer, Jakob Pernthaler, Mass effects meet species sorting: transformations of microbial assemblages in epiphreatic subsurface karst water pools. Environmental Microbiology. ,vol. 15, pp. 2476- 2488 ,(2013) , 10.1111/1462-2920.12124
Lejla Pašić, Barbara Kovče, Boris Sket, Blagajana Herzog-Velikonja, Diversity of microbial communities colonizing the walls of a Karstic cave in Slovenia FEMS Microbiology Ecology. ,vol. 71, pp. 50- 60 ,(2010) , 10.1111/J.1574-6941.2009.00789.X
Yongcui Deng, Xiaoyong Cui, Claudia Lüke, Marc G Dumont, None, Aerobic methanotroph diversity in Riganqiao peatlands on the Qinghai–Tibetan Plateau Environmental Microbiology Reports. ,vol. 5, pp. 566- 574 ,(2013) , 10.1111/1758-2229.12046
Elena Hutchens, Stefan Radajewski, Marc G. Dumont, Ian R. McDonald, J. Colin Murrell, Analysis of methanotrophic bacteria in Movile Cave by stable isotope probing. Environmental Microbiology. ,vol. 6, pp. 111- 120 ,(2003) , 10.1046/J.1462-2920.2003.00543.X
R. B. Skeie, P. Stier, T. Takemura, K. Tsigaridis, P. Wang, Z. Wang, L. Xu, H. Yu, F. Yu, J.-H. Yoon, K. Zhang, H. Zhang, C. Zhou, G. Myhre, B. H. Samset, M. Schulz, Y. Balkanski, S. Bauer, T. K. Berntsen, H. Bian, N. Bellouin, M. Chin, T. Diehl, R. C. Easter, J. Feichter, S. J. Ghan, D. Hauglustaine, T. Iversen, S. Kinne, A. Kirkevåg, J.-F. Lamarque, G. Lin, X. Liu, M. T. Lund, G. Luo, X. Ma, T. van Noije, J. E. Penner, P. J. Rasch, A. Ruiz, Ø. Seland, Radiative forcing of the direct aerosol effect from AeroCom Phase II simulations Atmospheric Chemistry and Physics. ,vol. 13, pp. 1853- 1877 ,(2013) , 10.5194/ACP-13-1853-2013
Ken Takai, Koki Horikoshi, Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes. Applied and Environmental Microbiology. ,vol. 66, pp. 5066- 5072 ,(2000) , 10.1128/AEM.66.11.5066-5072.2000
Marianyoly Ortiz, Julia W. Neilson, William M. Nelson, Antje Legatzki, Andrea Byrne, Yeisoo Yu, Rod A. Wing, Carol A. Soderlund, Barry M. Pryor, Leland S. Pierson, Raina M. Maier, Profiling Bacterial Diversity and Taxonomic Composition on Speleothem Surfaces in Kartchner Caverns, AZ Microbial Ecology. ,vol. 65, pp. 371- 383 ,(2013) , 10.1007/S00248-012-0143-6
Pravin Malla Shrestha, Claudia Kammann, Katharina Lenhart, Bomba Dam, Werner Liesack, Linking activity, composition and seasonal dynamics of atmospheric methane oxidizers in a meadow soil. The ISME Journal. ,vol. 6, pp. 1115- 1126 ,(2012) , 10.1038/ISMEJ.2011.179
ARTHUR N. PALMER, Origin and morphology of limestone caves Geological Society of America Bulletin. ,vol. 103, pp. 1- 21 ,(1991) , 10.1130/0016-7606(1991)103<0001:OAMOLC>2.3.CO;2