Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states

作者: S. Chandrasekaran , S. A. Ament , J. A. Eddy , S. L. Rodriguez-Zas , B. R. Schatz

DOI: 10.1073/PNAS.1114093108

关键词:

摘要: Using brain transcriptomic profiles from 853 individual honey bees exhibiting 48 distinct behavioral phenotypes in naturalistic contexts, we report that behavior-specific neurogenomic states can be inferred the coordinated action of transcription factors (TFs) and their predicted target genes. Unsupervised hierarchical clustering these showed three clusters correspond to ecologically important categories: aggression, maturation, foraging. To explore genetic influences potentially regulating states, reconstructed a transcriptional regulatory network (TRN) model. This TRN quantitatively predicts with high accuracy gene expression changes more than 2,000 genes involved behavior, even for on which it was not trained, suggesting there is core set TFs regulates bee brain, other specific particular categories. playing key roles include well-known regulators neural plasticity, e.g., Creb, as well better known biological NF-κB (immunity). Our results reveal insights concerning relationship between behavior. First, behaviors are subserved by brain. Second, underlying different rely upon both shared modules. Third, despite complexity simple linear relationships putative surprisingly prominent feature networks

参考文章(30)
Mark A Levenstien, Yaning Yang, Jürg Ott, Statistical significance for hierarchical clustering in genetic association and microarray expression studies. BMC Bioinformatics. ,vol. 4, pp. 62- 62 ,(2003) , 10.1186/1471-2105-4-62
Susan E. Fahrbach, Anne M. Etgen, T Rubin Robert, Arthur P. Arnold, Donald W. Pfaff, Hormones, brain, and behavior Academic Press. ,(2009)
Mark L. Winston, The Biology of the Honey Bee ,(1987)
G. E. Robinson, GENOMICS: Beyond Nature and Nurture Science. ,vol. 304, pp. 397- 399 ,(2004) , 10.1126/SCIENCE.1095766
Colleen A McClung, Eric J Nestler, Neuroplasticity Mediated by Altered Gene Expression Neuropsychopharmacology. ,vol. 33, pp. 3- 17 ,(2008) , 10.1038/SJ.NPP.1301544
Gene E. Robinson, Genomics and Integrative Analyses of Division of Labor in Honeybee Colonies The American Naturalist. ,vol. 160, ,(2002) , 10.1086/342901
C. W. Whitfield, Y. Ben-Shahar, C. Brillet, I. Leoncini, D. Crauser, Y. LeConte, S. Rodriguez-Zas, G. E. Robinson, Genomic dissection of behavioral maturation in the honey bee Proceedings of the National Academy of Sciences of the United States of America. ,vol. 103, pp. 16068- 16075 ,(2006) , 10.1073/PNAS.0606909103
J. W. Koo, S. J. Russo, D. Ferguson, E. J. Nestler, R. S. Duman, Nuclear factor-κB is a critical mediator of stress-impaired neurogenesis and depressive behavior Proceedings of the National Academy of Sciences of the United States of America. ,vol. 107, pp. 2669- 2674 ,(2010) , 10.1073/PNAS.0910658107
C. Mindy Nelson, Kate E Ihle, M. Kim Fondrk, Robert E Page, Gro V Amdam, The gene vitellogenin has multiple coordinating effects on social organization. PLOS Biology. ,vol. 5, pp. 673- 677 ,(2007) , 10.1371/JOURNAL.PBIO.0050062
Hugh G. Gauch, Robert H. Whittaker, Hierarchical Classification of Community Data Journal of Ecology. ,vol. 69, pp. 537- 557 ,(1981) , 10.2307/2259682