Genome-wide association studies of free amino acid levels by six multi-locus models in bread wheat.
作者： Yanchun Peng , Hongbo Liu , Jie Chen , Taotao Shi , Chi Zhang
关键词:
摘要: Genome-wide association studies (GWAS) have been widely used to dissect the complex biosynthetic processes of plant metabolome. Most studies have used single-locus GWAS approaches, such as mixed linear model (MLM), and little is known about more efficient algorithms to implement multi-locus GWAS. Here, we report a comprehensive GWAS of 20 free amino acid (FAA) levels in kernels of bread wheat (Triticum aestivum L.) based on 14,646 SNPs by six multi-locus models (FASTmrEMMA, FASTmrMLM, ISISEM-BLASSO …
frontiersin.org
cabdirect.org
sci-hub.se 参考文章(53)
Yong-Hwa Lee, Justin Foster, Janet Chen, Lars M. Voll, Andreas P.M. Weber, Mechthild Tegeder, AAP1 transports uncharged amino acids into roots of Arabidopsis Plant Journal. ,vol. 50, pp. 305- 319 ,(2007) , 10.1111/J.1365-313X.2007.03045.X
Xuekui Dong, Wei Chen, Wensheng Wang, Hongyan Zhang, Xianqing Liu, Jie Luo, Comprehensive profiling and natural variation of flavonoids in rice. Journal of Integrative Plant Biology. ,vol. 56, pp. 876- 886 ,(2014) , 10.1111/JIPB.12204
Sei Kang, Kiyoon Kang, Kyungjin Lee, Kyoungwhan Back, Characterization of rice tryptophan decarboxylases and their direct involvement in serotonin biosynthesis in transgenic rice. Planta. ,vol. 227, pp. 263- 272 ,(2007) , 10.1007/S00425-007-0614-Z
Huaiyu Yang, Melanie Krebs, York-Dieter Stierhof, Uwe Ludewig, Characterization of the putative amino acid transporter genes AtCAT2, 3 &4: the tonoplast localized AtCAT2 regulates soluble leaf amino acids. Journal of Plant Physiology. ,vol. 171, pp. 594- 601 ,(2014) , 10.1016/J.JPLPH.2013.11.012
Xuehui Huang, Xinghua Wei, Tao Sang, Qiang Zhao, Qi Feng, Yan Zhao, Canyang Li, Chuanrang Zhu, Tingting Lu, Zhiwu Zhang, Meng Li, Danlin Fan, Yunli Guo, Ahong Wang, Lu Wang, Liuwei Deng, Wenjun Li, Yiqi Lu, Qijun Weng, Kunyan Liu, Tao Huang, Taoying Zhou, Yufeng Jing, Wei Li, Zhang Lin, Edward S Buckler, Qian Qian, Qi-Fa Zhang, Jiayang Li, Bin Han, Genome-wide association studies of 14 agronomic traits in rice landraces Nature Genetics. ,vol. 42, pp. 961- 967 ,(2010) , 10.1038/NG.695
Angus S Murphy, Karen R Hoogner, Wendy Ann Peer, Lincoln Taiz, None, Identification, Purification, and Molecular Cloning of N-1-Naphthylphthalmic Acid-Binding Plasma Membrane-Associated Aminopeptidases from Arabidopsis Plant Physiology. ,vol. 128, pp. 935- 950 ,(2002) , 10.1104/PP.010519
Axel Hirner, Friederike Ladwig, Harald Stransky, Sakiko Okumoto, Melanie Keinath, Agnes Harms, Wolf B. Frommer, Wolfgang Koch, Arabidopsis LHT1 Is a High-Affinity Transporter for Cellular Amino Acid Uptake in Both Root Epidermis and Leaf Mesophyll The Plant Cell. ,vol. 18, pp. 1931- 1946 ,(2006) , 10.1105/TPC.106.041012
Jie Luo, Metabolite-based genome-wide association studies in plants. Current Opinion in Plant Biology. ,vol. 24, pp. 31- 38 ,(2015) , 10.1016/J.PBI.2015.01.006
L. Chae, T. Kim, R. Nilo-Poyanco, S. Y. Rhee, Genomic Signatures of Specialized Metabolism in Plants Science. ,vol. 344, pp. 510- 513 ,(2014) , 10.1126/SCIENCE.1252076
Eva KF Chan, Heather C Rowe, Bjarne G Hansen, Daniel J Kliebenstein, None, The Complex Genetic Architecture of the Metabolome PLOS Genetics. ,vol. 6, pp. 1001198- ,(2010) , 10.1371/JOURNAL.PGEN.1001198