Proton irradiation of DNA nucleosides in the gas phase

作者: Jean-Christophe Poully , Jordan Miles , Simone De Camillis , Amine Cassimi , Jason B. Greenwood

DOI: 10.1039/C4CP05303F

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摘要: The four DNA nucleosides guanosine, adenosine, cytidine and thymidine have been produced in the gas phase by a laser thermal desorption source, irradiated beam of protons with 5 keV kinetic energy. molecular ions as well energetic neutrals formed analyzed mass spectrometry order to shed light on ionization fragmentation processes triggered proton collision. A range 8–20 eV has estimated for binding energy electron captured proton. Glycosidic bond cleavage between base sugar observed high probability all nucleosides, resulting predominantly intact but not where are dominant. This behavior is influenced energies nucleobases (G < C T), which seems determine localization charge following initial ionization. transfer process can also be inferred from production protonated ions, similar dependence potential, although affinity might play role. Other dissociation pathways identified, including further moieties respectively, partial breakup ring without glycosidic mainly adenosine cytidine. These results show that irradiation important determining channels isolated could turn influence direct radiation damage DNA.

参考文章(64)
Chunxiang Yao, František Tureček, Michael J. Polce, Chrys Wesdemiotis, Proton and hydrogen atom adducts to cytosine. An experimental and computational study International Journal of Mass Spectrometry. ,vol. 265, pp. 106- 123 ,(2007) , 10.1016/J.IJMS.2007.01.013
O. González-Magaña, M. Tiemens, G. Reitsma, L. Boschman, M. Door, S. Bari, P. O. Lahaie, J. R. Wagner, M. A. Huels, R. Hoekstra, T. Schlathölter, Fragmentation of protonated oligonucleotides by energetic photons and Cq+ ions Physical Review A. ,vol. 87, pp. 032702- ,(2013) , 10.1103/PHYSREVA.87.032702
Michael Capron, Sergio Díaz-Tendero, Sylvain Maclot, Alicja Domaracka, Elie Lattouf, Arkadiusz Ławicki, Rémi Maisonny, Jean-Yves Chesnel, Alain Méry, Jean-Christophe Poully, Jimmy Rangama, Lamri Adoui, Fernando Martín, Manuel Alcamí, Patrick Rousseau, Bernd A. Huber, A Multicoincidence Study of Fragmentation Dynamics in Collision of γ-Aminobutyric Acid with Low-Energy Ions Chemistry - A European Journal. ,vol. 18, pp. 9321- 9332 ,(2012) , 10.1002/CHEM.201103922
R Trassl, P Hathiramani, F Broetz, J B Greenwood, R W McCullough, M Schlapp, E Salzborn, Characterization and recent modifications of a compact 10 GHz Electron Cyclotron Resonance (ECR) ion source for atomic physics experiments Physica Scripta. ,vol. 73, pp. 380- 381 ,(1997) , 10.1088/0031-8949/1997/T73/126
J. Tabet, S. Eden, S. Feil, H. Abdoul-Carime, B. Farizon, M. Farizon, S. Ouaskit, T.D. Märk, Mass spectrometry (fragmentation ratios) of DNA base molecules following 80 keV proton impact with separation of direct ionization and electron capture processes International Journal of Mass Spectrometry. ,vol. 292, pp. 53- 63 ,(2010) , 10.1016/J.IJMS.2010.03.002
Michael Schneider, Raman Maksimenka, F. Johannes Buback, Theofanis Kitsopoulos, Luis R. Lago, Ingo Fischer, Photodissociation of thymine. Physical Chemistry Chemical Physics. ,vol. 8, pp. 3017- 3021 ,(2006) , 10.1039/B518443F
Leila Sadr-Arani, Pierre Mignon, Henry Chermette, Thierry Douki, Theoretical and experimental study of the fragmentation of protonated uracil Chemical Physics Letters. ,vol. 605, pp. 108- 114 ,(2014) , 10.1016/J.CPLETT.2014.05.026
Rudy Delaunay, Jean-Philippe Champeaux, Sylvain Maclot, Michael Capron, Alicja Domaracka, Alain Méry, Bruno Manil, Lamri Adoui, Patrick Rousseau, Patrick Moretto-Capelle, Bernd A. Huber, Prompt and delayed fragmentation of bromouracil cations ionized by multiply charged ions European Physical Journal D. ,vol. 68, pp. 162- ,(2014) , 10.1140/EPJD/E2014-50073-Y
Stephan J. DeLuca, Kent J. Voorhees, A comparison of products from an air atmosphere tube furnace with a vacuum Curie-point pyrolyzer: Implications for biodetection Journal of Analytical and Applied Pyrolysis. ,vol. 24, pp. 211- 225 ,(1993) , 10.1016/0165-2370(93)85002-G